RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 TAF5LO75529 589 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 MARCKSP29966 332 aaPredicted RBP11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 MATR3P43243 847 aaKnown RBP eCLIP11.46□□□□□ -0.582e-7■■■□□ 16.8
EFCAB11-208ENST00000555872 SYKP43405 635 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 GCLCP48506 637 aaPredicted RBP11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 PAPOLAP51003 745 aaKnown RBP11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 USP11P51784 963 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 C4orf46Q504U0 113 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 FKBP15Q5T1M5 1219 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 MAB21L3Q8N8X9 362 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 DDX12PQ92771 950 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 GORASP1Q9BQQ3 440 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 LRP6O75581 1613 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 ADAMTS7Q9UKP4 1686 aa11.46□□□□□ -0.58
EFCAB11-208ENST00000555872 BICDL2A1A5D9 508 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 CDC27P30260 824 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 USP14P54578 494 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 MTHFSDQ2M296 383 aaKnown RBP11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 RNF187Q5TA31 235 aaPredicted RBP11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 ANKRD24Q8TF21 1146 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 WHAMMQ8TF30 809 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 ALS2CR12Q96Q35 445 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 SH3GL1Q99961 368 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 CCDC8Q9H0W5 538 aaPredicted RBP11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 MROH7-TTC4A0A0A0MT08 1334 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 LINC00854A0A1B0GVQ3 168 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 ALDH1L1O75891 902 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 ROR2Q01974 943 aaKnown RBP11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 TTLL7Q6ZT98 887 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 HINFPQ9BQA5 517 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 SELENOOQ9BVL4 669 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 YIPF3Q9GZM5 350 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 DDX20Q9UHI6 824 aaKnown RBP11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 TIMM22Q9Y584 194 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 PKD1L3Q7Z443 1732 aa11.45□□□□□ -0.58
EFCAB11-208ENST00000555872 HMGB1P1B2RPK0 211 aaPredicted RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 YEATS4O95619 227 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 RRM1P23921 792 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 CMA1P23946 247 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 CCDC40Q4G0X9 1142 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 CAPRIN2Q6IMN6 1127 aaKnown RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 SEPT14Q6ZU15 432 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 SNRKQ9NRH2 765 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 AXIN2Q9Y2T1 843 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 NFE2L3Q9Y4A8 694 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 OVOS2A0A0G2JMS6 1433 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 MED23Q9ULK4 1368 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 RGPD3A6NKT7 1758 aaPredicted RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 RGPD4Q7Z3J3 1758 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 LDHAP00338 332 aaKnown RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 CYP21A2P08686 494 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 ARHGAP25P42331 645 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 PDCLQ13371 301 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 CUL4BQ13620 913 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 SLC15A3Q8IY34 581 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 TRMT44Q8IYL2 757 aaKnown RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 POLR3EQ9NVU0 708 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 BABAM1Q9NWV8 329 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 PARP4Q9UKK3 1724 aaKnown RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 SSBP05455 408 aaKnown RBP eCLIP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 MCM3P25205 808 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 RBL2Q08999 1139 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 SLC4A8Q2Y0W8 1093 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 CCSAPQ6IQ19 270 aaPredicted RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 EDC3Q96F86 508 aaKnown RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 LTV1Q96GA3 475 aaPredicted RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 PANX2Q96RD6 677 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 PPP1R1BQ9UD71 204 aaPredicted RBP11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 TMCC3Q9ULS5 477 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 PRELID1Q9Y255 219 aa11.44□□□□□ -0.58
EFCAB11-208ENST00000555872 TMEM110-MUSTN1A8MSY1 372 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 GNAT3A8MTJ3 354 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 CEP104O60308 925 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 A1BGP04217 495 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 PDHBP11177 359 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 BMP6P22004 513 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 SMTNP53814 917 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 RASGRP2Q7LDG7 609 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 FOXP4Q8IVH2 680 aaPredicted RBP11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 LRRC59Q96AG4 307 aaKnown RBP11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 CEP295NLQ96MC4 621 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 SH3GL2Q99962 352 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 SLC39A2Q9NP94 309 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 HOOK1Q9UJC3 728 aaKnown RBP11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 PCDHA5Q9Y5H7 936 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 COL14A1Q05707 1796 aaKnown RBP11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 CARMIL3Q8ND23 1372 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 CACNA1FO60840 1977 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 ENC1O14682 589 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 GFPT2O94808 682 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 PARP1P09874 1014 aaKnown RBP11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 KIF11P52732 1056 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 ZC3H6P61129 1189 aaKnown RBP11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 TAF7Q15545 349 aaPredicted RBP11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 PARP10Q53GL7 1025 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 USPL1Q5W0Q7 1092 aa11.43□□□□□ -0.58
EFCAB11-208ENST00000555872 CCDC129Q6ZRS4 1044 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms