RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 SNHG28P0DPA3 235 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 CNTN2Q02246 1040 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 KCNA10Q16322 511 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 RRP12Q5JTH9 1297 aaKnown RBP10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 GPATCH4Q5T3I0 446 aaKnown RBP10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 SYDE2Q5VT97 1194 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 CCDC174Q6PII3 467 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 MORC4Q8TE76 937 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 BADQ92934 168 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 TRIM43Q96BQ3 446 aaPredicted RBP10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 MAF1Q9H063 256 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 VTA1Q9NP79 307 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 INCENPQ9NQS7 918 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 ADD3Q9UEY8 706 aaKnown RBP10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 STXBP5LQ9Y2K9 1186 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 UNC80Q8N2C7 3258 aa10.6□□□□□ -0.71
AC004828.1-201ENST00000555303 SOWAHBA6NEL2 793 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 ZNF213O14771 459 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 ADCY6O43306 1168 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 CABYRO75952 493 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 ASGR1P07306 291 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 PDHBP11177 359 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 RAG1P15918 1043 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 HAND2P61296 217 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 TNFAIP2Q03169 654 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 GNASQ5JWF2 1037 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 IQCA1Q86XH1 822 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 DGKHQ86XP1 1220 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 TBC1D10CQ8IV04 446 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 MPHOSPH6Q99547 160 aaKnown RBP10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 DSCC1Q9BVC3 393 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 MTMR10Q9NXD2 777 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 Q9Y3F1 56 aa10.59□□□□□ -0.71
AC004828.1-201ENST00000555303 TMEM265A0A087WTH1 108 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 MYADML2A6NDP7 307 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 TLR3O15455 904 aaKnown RBP10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 ZEB2O60315 1214 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 IGHDP01880 384 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 CDK7P50613 346 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 SMAD3P84022 425 aaKnown RBP10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 FPGSQ05932 587 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 ZNF543Q08ER8 600 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 FAAP100Q0VG06 881 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 MUM1L1Q5H9M0 696 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 IQSEC1Q6DN90 963 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 NSMFQ6X4W1 530 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 RASGRP2Q7LDG7 609 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 SH3RF1Q7Z6J0 888 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 TLK2Q86UE8 772 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 EXOC6Q8TAG9 804 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 CNNM2Q9H8M5 875 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 TMEM39AQ9NV64 488 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 CTNNA3Q9UI47 895 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 TBX21Q9UL17 535 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 MTMR7Q9Y216 660 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 GNEQ9Y223 722 aaKnown RBP10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 ASTN1O14525 1302 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 NEDD4P46934 1319 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 RAD50Q92878 1312 aa10.58□□□□□ -0.72
AC004828.1-201ENST00000555303 CDH23Q9H251 3354 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 B4DLN1 442 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 ARVCFO00192 962 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 CTAGE5O15320 804 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 TIMP1P01033 207 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 ALDH5A1P51649 535 aaPredicted RBP10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 MRPL12P52815 198 aaKnown RBP10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 SHHQ15465 462 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 FSCN1Q16658 493 aaKnown RBP10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 IMMTQ16891 758 aaKnown RBP10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 ZNF697Q5TEC3 545 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 TTBK2Q6IQ55 1244 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 CWC27Q6UX04 472 aaKnown RBP10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 Q7L0L9 218 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 AP5M1Q9H0R1 490 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 GPCPD1Q9NPB8 672 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 EYSQ5T1H1 3165 aa10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 FRMPD2Q68DX3 1309 aaPredicted RBP10.57□□□□□ -0.72
AC004828.1-201ENST00000555303 PTPDC1A2A3K4 754 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 NFIBO00712 420 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 SLC16A2P36021 539 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 SNAP25P60880 206 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 PPIGQ13427 754 aaKnown RBP eCLIP10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 BAATQ14032 418 aaPredicted RBP10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 DUSP28Q4G0W2 176 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 ASPRV1Q53RT3 343 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 C9orf50Q5SZB4 431 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 MFSD5Q6N075 450 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 TAPT1Q6NXT6 567 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 RNF207Q6ZRF8 634 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 NOL8Q76FK4 1167 aaKnown RBP10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 FAM126BQ8IXS8 530 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 SLC43A3Q8NBI5 491 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 PNMA1Q8ND90 353 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 RGS22Q8NE09 1264 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 DNERQ8NFT8 737 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 ANKS1AQ92625 1134 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 VTI1AQ96AJ9 217 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 CHMP4CQ96CF2 233 aa10.56□□□□□ -0.72
AC004828.1-201ENST00000555303 RNPC3Q96LT9 517 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms