RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 TNFRSF8P28908 595 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 NLRP5P59047 1200 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 SETQ01105 290 aaPredicted RBP11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 PAK1Q13153 545 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 TCP11X2Q5H9J9 407 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 ALS2CLQ60I27 953 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 DZIP1Q86YF9 867 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 GRAMD1CQ8IYS0 662 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 CCDC170Q8IYT3 715 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 SRBD1Q8N5C6 995 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 RETREG2Q8NC44 543 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 IQCDQ96DY2 449 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 C8orf37Q96NL8 207 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 TSGA10Q9BZW7 698 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 LEMD3Q9Y2U8 911 aa11.94□□□□□ -0.5
MTHFD1-210ENST00000555252 SRRM3A6NNA2 597 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 H7C1D1 291 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 CYLC1P35663 651 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 APBA1Q02410 837 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 DDR1Q08345 913 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 NPY5RQ15761 445 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 MEA1Q16626 185 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 FAM98CQ17RN3 349 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 ARL6IP4Q66PJ3 421 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 KLHL10Q6JEL2 608 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 YTHDF3Q7Z739 585 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 ZFP91Q96JP5 570 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 MMS19Q96T76 1030 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 NUP58Q9BVL2 599 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 KAT14Q9H8E8 782 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 TFCP2L1Q9NZI6 479 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 GUCA1BQ9UMX6 200 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 REXO2Q9Y3B8 237 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 RTCBQ9Y3I0 505 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 KCNJ18B7U540 433 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 LDHCP07864 332 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 INPP5BP32019 993 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 STX17P56962 302 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 NNTQ13423 1086 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 KCNJ12Q14500 433 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 ZNF174Q15697 407 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 EARS2Q5JPH6 523 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 ZNF658Q5TYW1 1059 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 GALNT17Q6IS24 598 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 EMBQ6PCB8 327 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 MICALCLQ6ZW33 695 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 USP49Q70CQ1 688 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 PRPF38AQ8NAV1 312 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 JAKMIP2Q96AA8 810 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 EPSTI1Q96J88 318 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 PURBQ96QR8 312 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 TCP11L1Q9NUJ3 509 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 GGA2Q9UJY4 613 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 CAPN11Q9UMQ6 739 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 CTNND2Q9UQB3 1225 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 LUC7L2Q9Y383 392 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 IRS2Q9Y4H2 1338 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 ROBO3Q96MS0 1386 aa11.93□□□□□ -0.5
MTHFD1-210ENST00000555252 BAZ2AQ9UIF9 1905 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 CCDC88AQ3V6T2 1871 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 FAM205CA6NFA0 338 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 SMIM22K7EJ46 135 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 KIF1CO43896 1103 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 IPO7O95373 1038 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 BAG3O95817 575 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 EEF1GP26641 437 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 KLRK1P26718 216 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 TM4SF1P30408 202 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 LONP1P36776 959 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 CCT5P48643 541 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 CDK17Q00537 523 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 PTGDRQ13258 359 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 CCDC122Q5T0U0 273 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 EMC10Q5UCC4 262 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 BCAS4Q8TDM0 211 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 NOC3LQ8WTT2 800 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 ZNHIT6Q9NWK9 470 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 GRIN2DO15399 1336 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 MYH10P35580 1976 aa11.92□□□□□ -0.5
MTHFD1-210ENST00000555252 GNPATO15228 680 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 FSBPO95073 299 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 ABL1P00519 1130 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 ATP1A1P05023 1023 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 LDHBP07195 334 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 PRDX5P30044 214 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 HNRNPH1P31943 449 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 CCT6AP40227 531 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 EPHB4P54760 987 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 PPP4CP60510 307 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 FAM47AQ5JRC9 791 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 C12orf60Q5U649 245 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 C15orf52Q6ZUT6 534 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 C1orf131Q8NDD1 294 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 LZTS2Q9BRK4 669 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 ZNF287Q9HBT7 754 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 MCM9Q9NXL9 1143 aa11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 SRP68Q9UHB9 627 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-210ENST00000555252 A0A087X0B3 334 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms