RNA–Protein interactions for RNA: ENST00000555034.5

FOXN3-208, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-208ENST00000555034 HS6ST3Q8IZP7 471 aa9.13□□□□□ -0.95
FOXN3-208ENST00000555034 GLT1D1Q96MS3 346 aa9.13□□□□□ -0.95
FOXN3-208ENST00000555034 MAF1Q9H063 256 aa9.13□□□□□ -0.95
FOXN3-208ENST00000555034 STARD7Q9NQZ5 370 aa9.13□□□□□ -0.95
FOXN3-208ENST00000555034 PDLIM7Q9NR12 457 aa9.13□□□□□ -0.95
FOXN3-208ENST00000555034 FBXO28Q9NVF7 368 aa9.13□□□□□ -0.95
FOXN3-208ENST00000555034 KIAA1468Q9P260 1216 aa9.13□□□□□ -0.95
FOXN3-208ENST00000555034 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
FOXN3-208ENST00000555034 SZT2Q5T011 3432 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 A0A1W2PQ45 241 aaPredicted RBP9.12□□□□□ -0.95
FOXN3-208ENST00000555034 A0A1W2PQY0 241 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 ADAMTS4O75173 837 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 CABYRO75952 493 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 PGK2P07205 417 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 PCP11498 1178 aaKnown RBP9.12□□□□□ -0.95
FOXN3-208ENST00000555034 RAG1P15918 1043 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 SLC1A4P43007 532 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 ACLYP53396 1101 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 NKX3-2P78367 333 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 TLE2Q04725 743 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 ACVR2BQ13705 512 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 TRIM60Q495X7 471 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 PRAMEF19Q5SWL8 479 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 SLFN13Q68D06 897 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 CLEC10AQ8IUN9 316 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 STAG1Q8WVM7 1258 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 KIFC2Q96AC6 838 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 CEP95Q96GE4 821 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 FSD1Q9BTV5 496 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 ACAD9Q9H845 621 aa9.12□□□□□ -0.95
FOXN3-208ENST00000555034 PRDM5Q9NQX1 630 aaPredicted RBP9.12□□□□□ -0.95
FOXN3-208ENST00000555034 TLR3O15455 904 aaKnown RBP9.11□□□□□ -0.95
FOXN3-208ENST00000555034 SMARCA5O60264 1052 aaPredicted RBP9.11□□□□□ -0.95
FOXN3-208ENST00000555034 ZEB2O60315 1214 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 MX1P20591 662 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 GJA9P57773 515 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 TFAP4Q01664 338 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 FPGSQ05932 587 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 PPARAQ07869 468 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 SLFNL1Q499Z3 407 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 ZMYM1Q5SVZ6 1142 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 KLHDC9Q8NEP7 349 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 BADQ92934 168 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 EVI5LQ96CN4 794 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 MPHOSPH6Q99547 160 aaKnown RBP9.11□□□□□ -0.95
FOXN3-208ENST00000555034 UPF3AQ9H1J1 476 aaKnown RBP9.11□□□□□ -0.95
FOXN3-208ENST00000555034 HELLSQ9NRZ9 838 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 TMEM39AQ9NV64 488 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.11□□□□□ -0.95
FOXN3-208ENST00000555034 ANAPC4Q9UJX5 808 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 Q9Y3F1 56 aa9.11□□□□□ -0.95
FOXN3-208ENST00000555034 ALPK3Q96L96 1907 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 A0A0U1RQG5 324 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 TRIM43BA6NCK2 446 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 TSPY2A6NKD2 308 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 B4DLN1 442 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 TMEM232C9JQI7 657 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 SNAI1O95863 264 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 PGK1P00558 417 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 TIMP1P01033 207 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 MRPL12P52815 198 aaKnown RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 MFAP1P55081 439 aaKnown RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 IKQ13123 557 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 PPIGQ13427 754 aaKnown RBP eCLIP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 SHHQ15465 462 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 ALX1Q15699 326 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 C20orf194Q5TEA3 1177 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 ANO1Q5XXA6 986 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 CPXCR1Q8N123 301 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 TMEM199Q8N511 208 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 PI4K2BQ8TCG2 481 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 FERMT2Q96AC1 680 aa9.1□□□□□ -0.95
FOXN3-208ENST00000555034 TRIM43Q96BQ3 446 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 MTIF3Q9H2K0 278 aaKnown RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 EPB41L4AQ9HCS5 686 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 ADD3Q9UEY8 706 aaKnown RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 ZHX1Q9UKY1 873 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-208ENST00000555034 RLFQ13129 1914 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 SYNRGQ9UMZ2 1314 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 ORC4O43929 436 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 PQBP1O60828 265 aaKnown RBP9.09□□□□□ -0.95
FOXN3-208ENST00000555034 PRDM1O75626 825 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 ASGR1P07306 291 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 FGRP09769 529 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 C6orf222P0C671 652 aaPredicted RBP9.09□□□□□ -0.95
FOXN3-208ENST00000555034 NOVP48745 357 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 CDK7P50613 346 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 KCNA10Q16322 511 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 CCDC178Q5BJE1 867 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 GNASQ5JWF2 1037 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 IQSEC1Q6DN90 963 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 CCSAPQ6IQ19 270 aaPredicted RBP9.09□□□□□ -0.95
FOXN3-208ENST00000555034 MFSD5Q6N075 450 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 Q7L0L9 218 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 ARMCX2Q7L311 632 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 FAM133AQ8N9E0 248 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 DCAF4Q8WV16 495 aa9.09□□□□□ -0.95
FOXN3-208ENST00000555034 RNPC3Q96LT9 517 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms