RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CAPRIN1Q14444 709 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 SMAP1Q8IYB5 467 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 MAIP1Q8WWC4 291 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 HADHQ16836 314 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 ZC3H12BQ5HYM0 836 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 RWDD4Q6NW29 188 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 ELMSAN1Q6PJG2 1045 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CCNYQ8ND76 341 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 PPHLN1Q8NEY8 458 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 TTC1Q99614 292 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 EIF2AQ9BY44 585 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 POC1B-GALNT4F8VUJ3 575 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CFLARO15519 480 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 EEF1GP26641 437 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 ARHGEF6Q15052 776 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CAPN7Q9Y6W3 813 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 H0YC42 278 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 GOLGA8SH3BPF8 625 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CCDC157Q569K6 752 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 KCTD17Q8N5Z5 321 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 DNAAF3Q8N9W5 541 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CABS1Q96KC9 395 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CUTAO60888 179 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 POLR2MP0CAP2 368 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 FAM98CQ17RN3 349 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CCDC184Q52MB2 194 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 TTC19Q6DKK2 380 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 GRK7Q8WTQ7 553 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 PCDH11XQ9BZA7 1347 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 PCDH11YQ9BZA8 1340 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 HIP1RO75146 1068 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 VCPP55072 806 aaKnown RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 KCNA1Q09470 495 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 GNPTABQ3T906 1256 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 LRRC23Q53EV4 343 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 NAA35Q5VZE5 725 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 CARD6Q9BX69 1037 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 FTOQ9C0B1 505 aaKnown RBP eCLIP7.5□□□□□ -1.21
SYNE2-216ENST00000555002 NOS1P29475 1434 aa7.5□□□□□ -1.21
SYNE2-216ENST00000555002 FASTKD5Q7L8L6 764 aaKnown RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 CROCCP2Q86T23 111 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 NUP58Q9BVL2 599 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 ARHGEF11O15085 1522 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 NPHP3Q7Z494 1330 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 PLEKHG3A1L390 1219 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 ARHGAP6O43182 974 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 SERPINI2O75830 405 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 OAS2P29728 719 aaKnown RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 NEMP1O14524 444 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 CDKL2Q92772 493 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 DACH2Q96NX9 599 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 POLR3CQ9BUI4 534 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 TEX12Q9BXU0 123 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 AS3MTQ9HBK9 375 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 TSKSQ9UJT2 592 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 BUB1O43683 1085 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 APBA3O96018 575 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 INHBAP08476 426 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 HSPD1P10809 573 aaKnown RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 ZBTB17Q13105 803 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 THOC5Q13769 683 aaKnown RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 POSTNQ15063 836 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 XRCC5P13010 732 aaKnown RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 ARHGDIAP52565 204 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 MYL7Q01449 175 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 UBE3AQ05086 875 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 GLE1Q53GS7 698 aaKnown RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 FRA10AC1Q70Z53 315 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 IFNLR1Q8IU57 520 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 LRRC8CQ8TDW0 803 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 TRIM55Q9BYV6 548 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 ZSCAN9O15535 394 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 DPY19L2Q6NUT2 758 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 TRIM67Q6ZTA4 783 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 TMTC3Q6ZXV5 915 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 FAM89AQ96GI7 184 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 TBC1D32Q96NH3 1257 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 HPS4Q9NQG7 708 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 OGFRQ9NZT2 677 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 DAAM1Q9Y4D1 1078 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 PEX19P40855 299 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 GNGT1P63211 74 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 CCDC85BQ15834 202 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 KLC3Q6P597 504 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 SCARA5Q6ZMJ2 495 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 PPM1KQ8N3J5 372 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 MAML1Q92585 1016 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 ZBTB18Q99592 522 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 HINFPQ9BQA5 517 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 BTG4Q9NY30 223 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 IL16Q14005 1332 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 KDM3AQ9Y4C1 1321 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 CLCA2Q9UQC9 943 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 MYH10P35580 1976 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 ZNF263O14978 683 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 N4BP1O75113 896 aaKnown RBP7.49□□□□□ -1.21
SYNE2-216ENST00000555002 TFDP1Q14186 410 aa7.49□□□□□ -1.21
SYNE2-216ENST00000555002 MYL1P05976 194 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms