RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 OSBP2Q969R2 916 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
SRP54-205ENST00000554803 WDR18Q9BV38 432 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 TRIM5Q9C035 493 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 RAI14Q9P0K7 980 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 LRP2BPQ9P2M1 347 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 ZNF532Q9HCE3 1301 aa12.76□□□□□ -0.37
SRP54-205ENST00000554803 M0R2C6 588 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
SRP54-205ENST00000554803 ITGB8P26012 769 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 BACE1P56817 501 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 FAM193AP78312 1265 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 MTMR2Q13614 643 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 RRP1BQ14684 758 aaKnown RBP12.75□□□□□ -0.37
SRP54-205ENST00000554803 Q6ZUG5 572 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 ADGRA1Q86SQ6 560 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 TRPV1Q8NER1 839 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 NAV1Q8NEY1 1877 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 KCNG4Q8TDN1 519 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
SRP54-205ENST00000554803 PAGR1Q9BTK6 254 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.75□□□□□ -0.372e-6■■■□□ 14.8
SRP54-205ENST00000554803 TMOD4Q9NZQ9 345 aa12.75□□□□□ -0.37
SRP54-205ENST00000554803 CCP110O43303 1012 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 IGSF3O75054 1194 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 YEATS4O95619 227 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 IGHA2P01877 340 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 HOXC6P09630 235 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 CYBAP13498 195 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 BTDP43251 543 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 EXOSC10Q01780 885 aaKnown RBP12.74□□□□□ -0.37
SRP54-205ENST00000554803 ATP2B2Q01814 1243 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 MECOMQ03112 1051 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 DRC7Q8IY82 874 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 NSUN7Q8NE18 718 aaKnown RBP12.74□□□□□ -0.37
SRP54-205ENST00000554803 ANKRD7Q92527 254 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 APPBP2Q92624 585 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 SNX27Q96L92 541 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 NECAB3Q96P71 396 aaPredicted RBP12.74□□□□□ -0.37
SRP54-205ENST00000554803 PUS7LQ9H0K6 701 aaKnown RBP12.74□□□□□ -0.37
SRP54-205ENST00000554803 KCNF1Q9H3M0 494 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 PRDM12Q9H4Q4 367 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 TACC3Q9Y6A5 838 aa12.74□□□□□ -0.37
SRP54-205ENST00000554803 PRRC2BQ5JSZ5 2229 aaKnown RBP12.73□□□□□ -0.37
SRP54-205ENST00000554803 SLC15A5A6NIM6 579 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 C19orf81C9J6K1 198 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 CYP21A2P08686 494 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 CLTBP09497 229 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 BMP1P13497 986 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 CYP7A1P22680 504 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 CYP2C19P33261 490 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 RHBDL3P58872 404 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 RBM10P98175 930 aaKnown RBP12.73□□□□□ -0.37
SRP54-205ENST00000554803 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 TLE2Q04725 743 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 FPGSQ05932 587 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 ADGRE1Q14246 886 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 ZRSR1Q15695 479 aaKnown RBP12.73□□□□□ -0.37
SRP54-205ENST00000554803 ZSCAN25Q6NSZ9 544 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 ALYREFQ86V81 257 aaKnown RBP12.73□□□□□ -0.37
SRP54-205ENST00000554803 DZIP1Q86YF9 867 aaKnown RBP12.73□□□□□ -0.37
SRP54-205ENST00000554803 NSUN4Q96CB9 384 aaKnown RBP12.73□□□□□ -0.37
SRP54-205ENST00000554803 GTPBP4Q9BZE4 634 aaKnown RBP12.73□□□□□ -0.37
SRP54-205ENST00000554803 RTEL1Q9NZ71 1219 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 CXXC1Q9P0U4 656 aaPredicted RBP12.73□□□□□ -0.37
SRP54-205ENST00000554803 CGNQ9P2M7 1197 aaKnown RBP12.73□□□□□ -0.37
SRP54-205ENST00000554803 BRWD1Q9NSI6 2320 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 LRRC37A2A6NM11 1700 aa12.73□□□□□ -0.37
SRP54-205ENST00000554803 MYH1P12882 1939 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 MROH7-TTC4A0A0A0MT08 1334 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 BECN2A8MW95 431 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 LDHCP07864 332 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 RAG1P15918 1043 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 PTPREP23469 700 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 ADCYAP1R1P41586 468 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 GSTO1P78417 241 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 CCDC85BQ15834 202 aaPredicted RBP12.72□□□□□ -0.37
SRP54-205ENST00000554803 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 FERMT3Q86UX7 667 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 CREBRFQ8IUR6 639 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 MIGA1Q8NAN2 632 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 NPLOC4Q8TAT6 608 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 PGBD1Q96JS3 809 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 ZMYND15Q9H091 742 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 EPHX3Q9H6B9 360 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 RABGAP1Q9Y3P9 1069 aa12.72□□□□□ -0.37
SRP54-205ENST00000554803 PTPDC1A2A3K4 754 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 USP17L10C9JJH3 530 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 NR1I2O75469 434 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 CNMDO75829 334 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 CDKL5O76039 1030 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 MBD4O95243 580 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 ASNSP08243 561 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.37
SRP54-205ENST00000554803 CCNA1P78396 465 aa12.71□□□□□ -0.37
SRP54-205ENST00000554803 SCRN1Q12765 414 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms