RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 HHIPL2Q6UWX4 724 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SYNE3Q6ZMZ3 975 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 TAX1BP1Q86VP1 789 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 AMIGO3Q86WK7 504 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 CREG2Q8IUH2 290 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SIAH1Q8IUQ4 282 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 GUF1Q8N442 669 aaKnown RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 C12orf50Q8NA57 414 aaPredicted RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 KIAA0895Q8NCT3 520 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 GRAPLQ8TC17 118 aaPredicted RBP3.91□□□□□ -1.78
SEC23A-207ENST00000554615 SENP7Q9BQF6 1050 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 EURLQ9NYK6 297 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 NEU2Q9Y3R4 380 aa3.91□□□□□ -1.78
SEC23A-207ENST00000554615 A0A1B0GVL5 298 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 ATP5J2-PTCD1G3V325 749 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 FOXN1O15353 648 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 SLC16A3O15427 465 aaKnown RBP3.9□□□□□ -1.78
SEC23A-207ENST00000554615 PTCD1O75127 700 aaKnown RBP3.9□□□□□ -1.78
SEC23A-207ENST00000554615 PNOCQ13519 176 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 KRT31Q15323 416 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 RTN1Q16799 776 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 CMPK2Q5EBM0 449 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 PI16Q6UXB8 463 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 CNGA4Q8IV77 575 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 DDX17Q92841 729 aaKnown RBP3.9□□□□□ -1.78
SEC23A-207ENST00000554615 GMCL1Q96IK5 515 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 WDR24Q96S15 920 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 NAP1L4Q99733 375 aaKnown RBP3.9□□□□□ -1.78
SEC23A-207ENST00000554615 KCNQ5Q9NR82 932 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 GINM1Q9NU53 330 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 RMND1Q9NWS8 449 aa3.9□□□□□ -1.78
SEC23A-207ENST00000554615 OPLAHO14841 1288 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 KINO60870 393 aaKnown RBP3.9□□□□□ -1.79
SEC23A-207ENST00000554615 OAS1P00973 400 aaKnown RBP3.9□□□□□ -1.79
SEC23A-207ENST00000554615 SCP2P22307 547 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 CALML3P27482 149 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 SLC12A3P55017 1021 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 ZC3H6P61129 1189 aaKnown RBP3.9□□□□□ -1.79
SEC23A-207ENST00000554615 MECOMQ03112 1051 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 LRRC63Q05C16 580 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 GRIPAP1Q4V328 841 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 C10orf76Q5T2E6 689 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 CCDC73Q6ZRK6 1079 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 DIS3L2Q8IYB7 885 aaKnown RBP3.9□□□□□ -1.79
SEC23A-207ENST00000554615 SYNE4Q8N205 404 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 UBR7Q8N806 425 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 SCFD2Q8WU76 684 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 ANP32BQ92688 251 aaKnown RBP3.9□□□□□ -1.79
SEC23A-207ENST00000554615 AIFM3Q96NN9 605 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 FANCLQ9NW38 375 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 IFNKQ9P0W0 207 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 SERTAD1Q9UHV2 236 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 VAV3Q9UKW4 847 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 CNTN6Q9UQ52 1028 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 SYNRGQ9UMZ2 1314 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 ANAPC1Q9H1A4 1944 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 UBE2Q2LH0YL09 131 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 PPP1R11O60927 126 aaPredicted RBP3.9□□□□□ -1.79
SEC23A-207ENST00000554615 TCEA3O75764 348 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 MBD4O95243 580 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 IARSP41252 1262 aaKnown RBP3.9□□□□□ -1.79
SEC23A-207ENST00000554615 COPB1P53618 953 aaKnown RBP3.9□□□□□ -1.79
SEC23A-207ENST00000554615 KCNMA1Q12791 1236 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 RASA2Q15283 850 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 FKBP1CQ5VVH2 108 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 KRT222Q8N1A0 295 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 LMO3Q8TAP4 145 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 STON2Q8WXE9 905 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 ESR2Q92731 530 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 HAS1Q92839 578 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 CENPTQ96BT3 561 aa3.9□□□□□ -1.79
SEC23A-207ENST00000554615 POLRMTO00411 1230 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 TP73O15350 636 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 CCNE1P24864 410 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 GNAQP50148 359 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 FXR1P51114 621 aaKnown RBP eCLIP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 DRG2P55039 364 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 PPATQ06203 517 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 BMS1Q14692 1282 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 PTPN14Q15678 1187 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 WWC2Q6AWC2 1192 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 LRIG3Q6UXM1 1119 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 UNC13DQ70J99 1090 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 FILIP1Q7Z7B0 1213 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 TRIM59Q8IWR1 403 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 CEP112Q8N8E3 955 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 SYMPKQ92797 1274 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 CD101Q93033 1021 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 INPP4AQ96PE3 977 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 TRIM9Q9C026 710 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 SEMA6BQ9H3T3 888 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 SH2D4AQ9H788 454 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 MED4Q9NPJ6 270 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 NLRP2Q9NX02 1062 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 MAP3K20Q9NYL2 800 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 KCND2Q9NZV8 630 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 NDUFB9Q9Y6M9 179 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 IGLV3-22A0A075B6J6 115 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 BTBD18B2RXH4 712 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 B4E1Z4 1266 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms