RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 FAM126BQ8IXS8 530 aa26.29■■□□□ 1.8
GABRB3-206ENST00000554556 TOMM22Q9NS69 142 aa26.29■■□□□ 1.8
GABRB3-206ENST00000554556 CYP39A1Q9NYL5 469 aa26.29■■□□□ 1.8
GABRB3-206ENST00000554556 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.28■■□□□ 1.8
GABRB3-206ENST00000554556 CTAGE5O15320 804 aa26.28■■□□□ 1.8
GABRB3-206ENST00000554556 FOSL2P15408 326 aa26.28■■□□□ 1.8
GABRB3-206ENST00000554556 RRP1P56182 461 aaKnown RBP26.28■■□□□ 1.8
GABRB3-206ENST00000554556 SNAP25P60880 206 aa26.28■■□□□ 1.8
GABRB3-206ENST00000554556 BEX3Q00994 111 aa26.28■■□□□ 1.8
GABRB3-206ENST00000554556 VPS53Q5VIR6 699 aa26.28■■□□□ 1.8
GABRB3-206ENST00000554556 TLK2Q86UE8 772 aa26.28■■□□□ 1.8
GABRB3-206ENST00000554556 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.28■■□□□ 1.8
GABRB3-206ENST00000554556 COL25A1Q9BXS0 654 aaPredicted RBP26.28■■□□□ 1.8
GABRB3-206ENST00000554556 SEZ6LQ9BYH1 1024 aa26.28■■□□□ 1.8
GABRB3-206ENST00000554556 GNEQ9Y223 722 aaKnown RBP26.28■■□□□ 1.8
GABRB3-206ENST00000554556 ICAM1P05362 532 aa26.27■■□□□ 1.8
GABRB3-206ENST00000554556 FGRP09769 529 aa26.27■■□□□ 1.8
GABRB3-206ENST00000554556 PDE1AP54750 535 aa26.27■■□□□ 1.8
GABRB3-206ENST00000554556 MCMDC2Q4G0Z9 681 aa26.27■■□□□ 1.8
GABRB3-206ENST00000554556 MUM1L1Q5H9M0 696 aa26.27■■□□□ 1.8
GABRB3-206ENST00000554556 NSMFQ6X4W1 530 aa26.27■■□□□ 1.8
GABRB3-206ENST00000554556 Q9Y3F1 56 aa26.27■■□□□ 1.8
GABRB3-206ENST00000554556 DYNC1LI2O43237 492 aaPredicted RBP26.26■■□□□ 1.79
GABRB3-206ENST00000554556 DNAJB2P25686 324 aa26.26■■□□□ 1.79
GABRB3-206ENST00000554556 FSCN1Q16658 493 aaKnown RBP26.26■■□□□ 1.79
GABRB3-206ENST00000554556 ASTN1O14525 1302 aa26.25■■□□□ 1.79
GABRB3-206ENST00000554556 CD4P01730 458 aa26.25■■□□□ 1.79
GABRB3-206ENST00000554556 FGAP02671 866 aa26.25■■□□□ 1.79
GABRB3-206ENST00000554556 TOP1P11387 765 aaKnown RBP26.25■■□□□ 1.79
GABRB3-206ENST00000554556 RRP12Q5JTH9 1297 aaKnown RBP26.25■■□□□ 1.79
GABRB3-206ENST00000554556 TMEM240Q5SV17 173 aa26.25■■□□□ 1.79
GABRB3-206ENST00000554556 CXCL17Q6UXB2 119 aa26.25■■□□□ 1.79
GABRB3-206ENST00000554556 BTNL9Q6UXG8 535 aa26.25■■□□□ 1.79
GABRB3-206ENST00000554556 PPP1R12CQ9BZL4 782 aa26.25■■□□□ 1.79
GABRB3-206ENST00000554556 RANBP17Q9H2T7 1088 aaKnown RBP26.25■■□□□ 1.79
GABRB3-206ENST00000554556 VTA1Q9NP79 307 aa26.25■■□□□ 1.79
GABRB3-206ENST00000554556 TCP11L1Q9NUJ3 509 aa26.25■■□□□ 1.79
GABRB3-206ENST00000554556 ADD3Q9UEY8 706 aaKnown RBP26.25■■□□□ 1.79
GABRB3-206ENST00000554556 CSF2RAP15509 400 aa26.24■■□□□ 1.79
GABRB3-206ENST00000554556 SMPD1P17405 629 aa26.24■■□□□ 1.79
GABRB3-206ENST00000554556 HDAC1Q13547 482 aaPredicted RBP26.24■■□□□ 1.79
GABRB3-206ENST00000554556 ITGA7Q13683 1181 aa26.24■■□□□ 1.79
GABRB3-206ENST00000554556 SYDE2Q5VT97 1194 aa26.24■■□□□ 1.79
GABRB3-206ENST00000554556 PSRC1Q6PGN9 363 aaPredicted RBP26.24■■□□□ 1.79
GABRB3-206ENST00000554556 EEPD1Q7L9B9 569 aa26.24■■□□□ 1.79
GABRB3-206ENST00000554556 SLC43A3Q8NBI5 491 aa26.24■■□□□ 1.79
GABRB3-206ENST00000554556 PNMA2Q9UL42 364 aa26.24■■□□□ 1.79
GABRB3-206ENST00000554556 LAMA2P24043 3122 aaKnown RBP26.23■■□□□ 1.79
GABRB3-206ENST00000554556 LOC102724159A0A0B4J2E5 919 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 SLC16A2P36021 539 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 PWP2Q15269 919 aaKnown RBP26.23■■□□□ 1.79
GABRB3-206ENST00000554556 TTBK2Q6IQ55 1244 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 TAPT1Q6NXT6 567 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 KIAA1211Q6ZU35 1233 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 MORC4Q8TE76 937 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 TIFAQ96CG3 184 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 CRBNQ96SW2 442 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 TMEM47Q9BQJ4 181 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 PDGFCQ9NRA1 345 aa26.23■■□□□ 1.79
GABRB3-206ENST00000554556 C16orf59Q7L2K0 433 aa26.22■■□□□ 1.79
GABRB3-206ENST00000554556 RASGRP2Q7LDG7 609 aa26.22■■□□□ 1.79
GABRB3-206ENST00000554556 FBXO16Q8IX29 292 aaPredicted RBP26.22■■□□□ 1.79
GABRB3-206ENST00000554556 FAM227BQ96M60 508 aa26.22■■□□□ 1.79
GABRB3-206ENST00000554556 MTIF3Q9H2K0 278 aaKnown RBP26.22■■□□□ 1.79
GABRB3-206ENST00000554556 ZNF576Q9H609 170 aa26.22■■□□□ 1.79
GABRB3-206ENST00000554556 HSPD1P10809 573 aaKnown RBP26.21■■□□□ 1.79
GABRB3-206ENST00000554556 PCP11498 1178 aaKnown RBP26.21■■□□□ 1.79
GABRB3-206ENST00000554556 BAATQ14032 418 aaPredicted RBP26.21■■□□□ 1.79
GABRB3-206ENST00000554556 GRIN2CQ14957 1233 aa26.21■■□□□ 1.79
GABRB3-206ENST00000554556 ZNF365Q70YC5 407 aa26.21■■□□□ 1.79
GABRB3-206ENST00000554556 TTC14Q96N46 770 aa26.21■■□□□ 1.79
GABRB3-206ENST00000554556 HIPK3Q9H422 1215 aa26.21■■□□□ 1.79
GABRB3-206ENST00000554556 GPCPD1Q9NPB8 672 aa26.21■■□□□ 1.79
GABRB3-206ENST00000554556 IL23AQ9NPF7 189 aa26.21■■□□□ 1.79
GABRB3-206ENST00000554556 LRRC37A2A6NM11 1700 aa26.21■■□□□ 1.79
GABRB3-206ENST00000554556 ZMYM6O95789 1325 aa26.2■■□□□ 1.79
GABRB3-206ENST00000554556 A0A0C4DFX4 3053 aa26.2■■□□□ 1.78
GABRB3-206ENST00000554556 A0A0D9SFI3 127 aa26.2■■□□□ 1.78
GABRB3-206ENST00000554556 TRIM6-TRIM34B2RNG4 842 aa26.2■■□□□ 1.78
GABRB3-206ENST00000554556 ACRP10323 421 aa26.2■■□□□ 1.78
GABRB3-206ENST00000554556 CYP2C18P33260 490 aa26.2■■□□□ 1.78
GABRB3-206ENST00000554556 RASIP1Q5U651 963 aa26.2■■□□□ 1.78
GABRB3-206ENST00000554556 FRMPD2Q68DX3 1309 aaPredicted RBP26.19■■□□□ 1.78
GABRB3-206ENST00000554556 PTPDC1A2A3K4 754 aa26.19■■□□□ 1.78
GABRB3-206ENST00000554556 ALDH5A1P51649 535 aaPredicted RBP26.19■■□□□ 1.78
GABRB3-206ENST00000554556 MFAP1P55081 439 aaKnown RBP26.19■■□□□ 1.78
GABRB3-206ENST00000554556 DUSP28Q4G0W2 176 aa26.19■■□□□ 1.78
GABRB3-206ENST00000554556 MFSD6Q6ZSS7 791 aa26.19■■□□□ 1.78
GABRB3-206ENST00000554556 MPHOSPH6Q99547 160 aaKnown RBP26.19■■□□□ 1.78
GABRB3-206ENST00000554556 DDX49Q9Y6V7 483 aaKnown RBP26.19■■□□□ 1.78
GABRB3-206ENST00000554556 LCTP09848 1927 aa26.19■■□□□ 1.78
GABRB3-206ENST00000554556 FGBP02675 491 aa26.18■■□□□ 1.78
GABRB3-206ENST00000554556 HERVK_113Q902F9 699 aa26.18■■□□□ 1.78
GABRB3-206ENST00000554556 PURBQ96QR8 312 aaKnown RBP26.18■■□□□ 1.78
GABRB3-206ENST00000554556 CCDC171Q6TFL3 1326 aa26.17■■□□□ 1.78
GABRB3-206ENST00000554556 NFIBO00712 420 aa26.17■■□□□ 1.78
GABRB3-206ENST00000554556 PDHBP11177 359 aa26.17■■□□□ 1.78
GABRB3-206ENST00000554556 HAND2P61296 217 aa26.17■■□□□ 1.78
GABRB3-206ENST00000554556 NMIQ13287 307 aaPredicted RBP26.17■■□□□ 1.78
GABRB3-206ENST00000554556 AAMPQ13685 434 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms