RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 LCMT1Q9UIC8 334 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 CLIC4Q9Y696 253 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 LAMA4Q16363 1823 aa2.95□□□□□ -1.94
PRPF39-207ENST00000554439 SPATA31C2B4DYI2 1134 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TMEM232C9JQI7 657 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 URI1O94763 535 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ZRANB2O95218 330 aaKnown RBP eCLIP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 SFPQP23246 707 aaKnown RBP eCLIP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 LTKP29376 864 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 NBPF6Q5VWK0 638 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TRIM65Q6PJ69 517 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 SMARCC2Q8TAQ2 1214 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 LRRC59Q96AG4 307 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 NBPF4Q96M43 638 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 UTP14AQ9BVJ6 771 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 HSD3B7Q9H2F3 369 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ZSCAN16Q9H4T2 348 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 SUV39H2Q9H5I1 410 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 CALCOCO1Q9P1Z2 691 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ORC3Q9UBD5 711 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 DBNLQ9UJU6 430 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 GPC6Q9Y625 555 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 PIK3C2AO00443 1686 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TOPAZ1Q8N9V7 1692 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TECPR2O15040 1411 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 CEMIPQ8WUJ3 1361 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 GRM8O00222 908 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 HIP1O00291 1037 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ENPP3O14638 875 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 CTAGE5O15320 804 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 PFKFB2O60825 505 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 PHACTR2O75167 634 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ALDH1L1O75891 902 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 CAVIN2O95810 425 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 IGKV5-2P06315 115 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 XRCC5P13010 732 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 FDPSP14324 419 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 MYL6BP14649 208 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 GARTP22102 1010 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 HSD3B2P26439 372 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 SOX9P48436 509 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 WDR4P57081 412 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 GSDMDP57764 484 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TFCP2Q12800 502 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 NCAPHQ15003 741 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 FBXL19Q6PCT2 694 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 KSR2Q6VAB6 950 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 KRBA2Q6ZNG9 492 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ERC1Q8IUD2 1116 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 KIAA0825Q8IV33 1275 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 CMTR1Q8N1G2 835 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TTC16Q8NEE8 873 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 MKL1Q969V6 931 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 RHOVQ96L33 236 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 WDR24Q96S15 920 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ZIC5Q96T25 663 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 SPON2Q9BUD6 331 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ALDH8A1Q9H2A2 487 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 LATS2Q9NRM7 1088 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 KCND1Q9NSA2 647 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 FEZ2Q9UHY8 353 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 PTPRUQ92729 1446 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 JCADQ9P266 1359 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 A0A0U1RQJ8 604 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TADA3O75528 432 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TBC1D8O95759 1140 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 EGFRP00533 1210 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ITGA6P23229 1130 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 OAS2P29728 719 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 MARCKSP29966 332 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 GSTT1P30711 240 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 PHKA2P46019 1235 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 EVCP57679 992 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ETF1P62495 437 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 RASA3Q14644 834 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 HIF1AQ16665 826 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 KIAA0319Q5VV43 1072 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TTLL5Q6EMB2 1281 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 TMCO3Q6UWJ1 677 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 REXO1L1PQ8IX06 675 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 MEIOBQ8N635 442 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 MNS1Q8NEH6 495 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 ATRIPQ8WXE1 791 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 MRPS27Q92552 414 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 AIDAQ96BJ3 306 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 RNPC3Q96LT9 517 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 DBNDD2Q9BQY9 259 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 GINM1Q9NU53 330 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 HMG20BQ9P0W2 317 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 IMPACTQ9P2X3 320 aa2.94□□□□□ -1.94
PRPF39-207ENST00000554439 DBF4Q9UBU7 674 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 FNDC3AQ9Y2H6 1198 aaKnown RBP2.94□□□□□ -1.94
PRPF39-207ENST00000554439 AGLP35573 1532 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 RGPD2P0DJD1 1756 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 ADAMTS13Q76LX8 1427 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 CARMIL3Q8ND23 1372 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 MROH7-TTC4A0A0A0MT08 1334 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 SALL1Q9NSC2 1324 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 TSPOAP1O95153 1857 aa2.93□□□□□ -1.94
PRPF39-207ENST00000554439 VWA3AA6NCI4 1184 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms