RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
SIX4-202ENST00000554079 AGAP3Q96P47 875 aa10.57□□□□□ -0.72
SIX4-202ENST00000554079 PURBQ96QR8 312 aaKnown RBP10.57□□□□□ -0.72
SIX4-202ENST00000554079 CHP1Q99653 195 aa10.57□□□□□ -0.72
SIX4-202ENST00000554079 ADAM22Q9P0K1 906 aa10.57□□□□□ -0.72
SIX4-202ENST00000554079 CNOT8Q9UFF9 292 aaKnown RBP10.57□□□□□ -0.72
SIX4-202ENST00000554079 TMCO1Q9UM00 188 aa10.57□□□□□ -0.72
SIX4-202ENST00000554079 TFR2Q9UP52 801 aa10.57□□□□□ -0.72
SIX4-202ENST00000554079 RIMS1Q86UR5 1692 aaKnown RBP10.56□□□□□ -0.72
SIX4-202ENST00000554079 A8MUI8 341 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 PPP6R2O75170 966 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 GNAZP19086 355 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 POLE2P56282 527 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 ZNF827Q17R98 1081 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 CCDC122Q5T0U0 273 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 RNF220Q5VTB9 566 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 CCDC102BQ68D86 513 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 STOX1Q6ZVD7 989 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 APBB1IPQ7Z5R6 666 aaPredicted RBP10.56□□□□□ -0.72
SIX4-202ENST00000554079 FAM114A1Q8IWE2 563 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 LMNTD2Q8IXW0 634 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 CCDC155Q8N6L0 562 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 CCDC197Q8NCU1 140 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 PHC3Q8NDX5 983 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 KCNN1Q92952 543 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 AZIN2Q96A70 460 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 NDNQ99608 321 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 DMAP1Q9NPF5 467 aaPredicted RBP10.56□□□□□ -0.72
SIX4-202ENST00000554079 GDF3Q9NR23 364 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 PIK3C2BO00750 1634 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 FER1L4A9Z1Z3 1794 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 RFX7Q2KHR2 1363 aa10.56□□□□□ -0.72
SIX4-202ENST00000554079 PHF20L1A8MW92 1017 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 SEMA3EO15041 775 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 WFS1O76024 890 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 MBD4O95243 580 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 DESP17661 470 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 ATP6V1C1P21283 382 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 ERCC5P28715 1186 aaPredicted RBP10.55□□□□□ -0.72
SIX4-202ENST00000554079 CDC25AP30304 524 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 ITIH4Q14624 930 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 PTPAQ15257 358 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 FKBP15Q5T1M5 1219 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 GGT6Q6P531 493 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 LRIG3Q6UXM1 1119 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 MAEAQ7L5Y9 396 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 LINS1Q8NG48 757 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 KCNV2Q8TDN2 545 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 GPATCH3Q96I76 525 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 RPS6KC1Q96S38 1066 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 MTRQ99707 1265 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 SNX12Q9UMY4 172 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 PLAAQ9Y263 795 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 ZNF189O75820 626 aaPredicted RBP10.55□□□□□ -0.72
SIX4-202ENST00000554079 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
SIX4-202ENST00000554079 GJA8P48165 433 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 CARSP49589 748 aaKnown RBP10.55□□□□□ -0.72
SIX4-202ENST00000554079 VAV2P52735 878 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 PPP2R2AP63151 447 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 KIF23Q02241 960 aaPredicted RBP10.55□□□□□ -0.72
SIX4-202ENST00000554079 TRIM68Q6AZZ1 485 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 GALNT17Q6IS24 598 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 TRIML1Q8N9V2 468 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 FGD4Q96M96 766 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 PLCB1Q9NQ66 1216 aa10.55□□□□□ -0.72
SIX4-202ENST00000554079 ABCC12Q96J65 1359 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 RCCD1A6NED2 376 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 H0YGN5 161 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 LGR5O75473 907 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 BAG3O95817 575 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 CYP21A2P08686 494 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 RARAP10276 462 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 IDEP14735 1019 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 HSPA9P38646 679 aaKnown RBP10.54□□□□□ -0.72
SIX4-202ENST00000554079 RFC5P40937 340 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 CCDC15Q0P6D6 951 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 KIF5AQ12840 1032 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 TRIM14Q14142 442 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 POSTNQ15063 836 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 ENOX2Q16206 610 aaKnown RBP10.54□□□□□ -0.72
SIX4-202ENST00000554079 SPATA1Q5VX52 437 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 TMEM154Q6P9G4 183 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 CPLX4Q7Z7G2 160 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 SESTD1Q86VW0 696 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 CLASRPQ8N2M8 674 aaKnown RBP10.54□□□□□ -0.72
SIX4-202ENST00000554079 SMYD1Q8NB12 490 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 KLHDC4Q8TBB5 520 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 CTAGE1Q96RT6 745 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 NFU1Q9UMS0 254 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 WDR37Q9Y2I8 494 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 NFS1Q9Y697 457 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 BZW2Q9Y6E2 419 aaKnown RBP10.54□□□□□ -0.72
SIX4-202ENST00000554079 SYNRGQ9UMZ2 1314 aa10.54□□□□□ -0.72
SIX4-202ENST00000554079 IGF2BP3O00425 579 aaKnown RBP eCLIP10.53□□□□□ -0.72
SIX4-202ENST00000554079 KRT16P08779 473 aa10.53□□□□□ -0.72
SIX4-202ENST00000554079 PDIA3P30101 505 aaKnown RBP10.53□□□□□ -0.72
SIX4-202ENST00000554079 EXOSC10Q01780 885 aaKnown RBP10.53□□□□□ -0.72
SIX4-202ENST00000554079 BTG3Q14201 252 aaPredicted RBP10.53□□□□□ -0.72
SIX4-202ENST00000554079 CCDC129Q6ZRS4 1044 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms