RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 F6X3S4 739 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 EFSO43281 561 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 ENTPD3O75355 529 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 FAM157BP0CG42 384 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 CCND3P30281 292 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-224ENST00000554040 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
ATXN3-224ENST00000554040 LRRC24Q50LG9 513 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 ARSJQ5FYB0 599 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-224ENST00000554040 METTL24Q5JXM2 366 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 C9orf50Q5SZB4 431 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 FCHSD1Q86WN1 690 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 DEPDC4Q8N2C3 294 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 VGLL2Q8N8G2 317 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 IDI2Q9BXS1 227 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 ASCC2Q9H1I8 757 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-224ENST00000554040 C9orf78Q9NZ63 289 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-224ENST00000554040 MORF4L1Q9UBU8 362 aa8.59□□□□□ -1.03
ATXN3-224ENST00000554040 KIF16BQ96L93 1317 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 TMEM265A0A087WTH1 108 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 USP17L5A8MUK1 530 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 LZTS3O60299 673 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-224ENST00000554040 ADAM23O75077 832 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 ZEB1P37275 1124 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-224ENST00000554040 RGS3P49796 1198 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 MAP3K12Q12852 859 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 SPP2Q13103 211 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 SAMD5Q5TGI4 173 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 CCDC84Q86UT8 332 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-224ENST00000554040 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-224ENST00000554040 USP38Q8NB14 1042 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 SOCS4Q8WXH5 440 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 USP6NLQ92738 828 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 KAZALD1Q96I82 304 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-224ENST00000554040 KIAA1024Q9UPX6 916 aa8.58□□□□□ -1.04
ATXN3-224ENST00000554040 DDTLA6NHG4 134 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-224ENST00000554040 KHNYNO15037 678 aaKnown RBP8.57□□□□□ -1.04
ATXN3-224ENST00000554040 IFIT1P09914 478 aaKnown RBP8.57□□□□□ -1.04
ATXN3-224ENST00000554040 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-224ENST00000554040 FGFR2P21802 821 aa8.57□□□□□ -1.04
ATXN3-224ENST00000554040 PRDX5P30044 214 aa8.57□□□□□ -1.04
ATXN3-224ENST00000554040 RTP1P59025 263 aa8.57□□□□□ -1.04
ATXN3-224ENST00000554040 ZNF280CQ8ND82 737 aa8.57□□□□□ -1.04
ATXN3-224ENST00000554040 GPRC5AQ8NFJ5 357 aa8.57□□□□□ -1.04
ATXN3-224ENST00000554040 ATXN2LQ8WWM7 1075 aaKnown RBP8.57□□□□□ -1.04
ATXN3-224ENST00000554040 SUCLG2Q96I99 432 aa8.57□□□□□ -1.04
ATXN3-224ENST00000554040 UCN2Q96RP3 112 aa8.57□□□□□ -1.04
ATXN3-224ENST00000554040 DDX60LQ5H9U9 1706 aaKnown RBP8.57□□□□□ -1.04
ATXN3-224ENST00000554040 MYO9BQ13459 2157 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 EML1O00423 815 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 BACH1O14867 736 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 VAMP4O75379 141 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 ALDH1L1O75891 902 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 LDHBP07195 334 aaKnown RBP8.56□□□□□ -1.04
ATXN3-224ENST00000554040 AMPD1P23109 780 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 MAPK4P31152 587 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 RGS2P41220 211 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 HMGCS2P54868 508 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 PDE3AQ14432 1141 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 GRIN2CQ14957 1233 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 PUM3Q15397 648 aaKnown RBP8.56□□□□□ -1.04
ATXN3-224ENST00000554040 TEAD4Q15561 434 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 CCL14Q16627 93 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 ALYREFQ86V81 257 aaKnown RBP8.56□□□□□ -1.04
ATXN3-224ENST00000554040 BADQ92934 168 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 P2RX7Q99572 595 aaKnown RBP8.56□□□□□ -1.04
ATXN3-224ENST00000554040 MDFIQ99750 246 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 TXNRD2Q9NNW7 524 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-224ENST00000554040 BDP1A6H8Y1 2624 aa8.56□□□□□ -1.04
ATXN3-224ENST00000554040 DNM1LO00429 736 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 MSCO60682 206 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 PEX10O60683 326 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 ADH6P28332 368 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 HOXA7P31268 230 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-224ENST00000554040 IRX3P78415 501 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-224ENST00000554040 RABL6Q3YEC7 729 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-224ENST00000554040 TBCELQ5QJ74 424 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 CHSY3Q70JA7 882 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 LPAR1Q92633 364 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 ASB2Q96Q27 587 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 OSBPL5Q9H0X9 879 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-224ENST00000554040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-224ENST00000554040 DDX4Q9NQI0 724 aaKnown RBP8.55□□□□□ -1.04
ATXN3-224ENST00000554040 RBPJLQ9UBG7 517 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 ATP11BQ9Y2G3 1177 aa8.55□□□□□ -1.04
ATXN3-224ENST00000554040 AK9Q5TCS8 1911 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 GNB5O14775 395 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 NBPF7P0C2Y1 421 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-224ENST00000554040 SLC5A1P13866 664 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 NOS2P35228 1153 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 CLDN10P78369 228 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 ZNF468Q5VIY5 522 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-224ENST00000554040 MFSD14CQ5VZR4 134 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 SLC39A5Q6ZMH5 540 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 GPR142Q7Z601 462 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 PLEKHH3Q7Z736 793 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 SLC9A9Q8IVB4 645 aa8.54□□□□□ -1.04
ATXN3-224ENST00000554040 PLEKHM2Q8IWE5 1019 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms