RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 RGMBQ6NW40 437 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 KRT25Q7Z3Z0 450 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 MCF2L2Q86YR7 1114 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 CPXCR1Q8N123 301 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 REXO1Q8N1G1 1221 aaKnown RBP11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 MB21D1Q8N884 522 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 SCAND2PQ9GZW5 306 aaPredicted RBP11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 SLC38A10Q9HBR0 1119 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 RIC8AQ9NPQ8 531 aa11.98□□□□□ -0.49
TMEM55B-205ENST00000554028 ATAD5Q96QE3 1844 aa11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 CCL15-CCL14A0A0B4J2E2 113 aa11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 PPP1R11O60927 126 aaPredicted RBP11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 MCM4P33991 863 aa11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 DNM1Q05193 864 aaKnown RBP11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 NR5A1Q13285 461 aa11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 CCL15Q16663 113 aa11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 SAPCD2Q86UD0 394 aa11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 GTF3C2Q8WUA4 911 aaPredicted RBP11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 ATG4CQ96DT6 458 aa11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 RAVER2Q9HCJ3 691 aaKnown RBP11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 TFIP11Q9UBB9 837 aaKnown RBP11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 CEP131Q9UPN4 1083 aa11.97□□□□□ -0.49
TMEM55B-205ENST00000554028 GOLGA6L4A6NEF3 574 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 MANSC4A6NHS7 340 aaPredicted RBP11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 KIF28PB7ZC32 967 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 FOSP01100 380 aaPredicted RBP11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 ALAS1P13196 640 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 GJA5P36382 358 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 TRAPPC10P48553 1259 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 INHBEP58166 350 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 C1QTNF8P60827 252 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 PLS1Q14651 629 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 NONOQ15233 471 aaKnown RBP eCLIP11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 SF3A1Q15459 793 aaKnown RBP11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 TKFCQ3LXA3 575 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 TREML2Q5T2D2 321 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 FAM173BQ6P4H8 233 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 PIK3AP1Q6ZUJ8 805 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 SAMD3Q8N6K7 520 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 OXER1Q8TDS5 423 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 SPATA32Q96LK8 384 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 EHMT1Q9H9B1 1298 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 BIN2Q9UBW5 565 aaPredicted RBP11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 PCDHA6Q9UN73 950 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 ADAMTS5Q9UNA0 930 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 SLC45A1Q9Y2W3 748 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 PCDHA8Q9Y5H6 950 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 TLL2Q9Y6L7 1015 aa11.96□□□□□ -0.49
TMEM55B-205ENST00000554028 SPDYE3A6NKU9 549 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 GCOM1H8Y6P7 765 aaPredicted RBP11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 ATP2A1O14983 1001 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 BMP15O95972 392 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 POLR2MP0CAP2 368 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 AP3B2Q13367 1082 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 STK38Q15208 465 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 JAKMIP3Q5VZ66 844 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 ANKRD23Q86SG2 305 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 JMYQ8N9B5 988 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 HHIPL1Q96JK4 782 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 AGBL1Q96MI9 1066 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 DCBLD2Q96PD2 775 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 P2RX7Q99572 595 aaKnown RBP11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 NAP1L4Q99733 375 aaKnown RBP11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 TEX13BQ9BXU2 312 aa11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 ASCC2Q9H1I8 757 aaPredicted RBP11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 MAP3K20Q9NYL2 800 aaKnown RBP11.95□□□□□ -0.5
TMEM55B-205ENST00000554028 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 PDHXO00330 501 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 FIBPO43427 364 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 PRPF40AO75400 957 aaKnown RBP11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 CFBP00751 764 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 ATP2B1P20020 1258 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 COPB2P35606 906 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 STAT3P40763 770 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 HERVK_113P62684 666 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 CEBPZQ03701 1054 aaKnown RBP11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 NFKBIBQ15653 356 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 NPY5RQ15761 445 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 ANO1Q5XXA6 986 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 SNRNP48Q6IEG0 339 aaKnown RBP11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 GPAT2Q6NUI2 795 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 LBX2Q6XYB7 198 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 PAXIP1Q6ZW49 1069 aaPredicted RBP11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 RASAL3Q86YV0 1011 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 KCNG4Q8TDN1 519 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 SMCR8Q8TEV9 937 aaPredicted RBP11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 SHISA4Q96DD7 197 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 TRERF1Q96PN7 1200 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 MAF1Q9H063 256 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 POLR3EQ9NVU0 708 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 RTEL1Q9NZ71 1219 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 FBXO40Q9UH90 709 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 CNPY2Q9Y2B0 182 aa11.94□□□□□ -0.5
TMEM55B-205ENST00000554028 ZNF536O15090 1300 aa11.93□□□□□ -0.5
TMEM55B-205ENST00000554028 M0R2N6 131 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms