RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 CTR9Q6PD62 1173 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 CXCL17Q6UXB2 119 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 TICAM2Q86XR7 235 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 PLEKHM2Q8IWE5 1019 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 CCDC144CPQ8IYA2 1237 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 ANKRD35Q8N283 1001 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 FAM133AQ8N9E0 248 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 PHOSPHO2Q8TCD6 241 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 PI4K2BQ8TCG2 481 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 DNAJC2Q99543 621 aaKnown RBP9.2□□□□□ -0.94
ABCD4-220ENST00000553998 C11orf16Q9NQ32 467 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 PAG1Q9NWQ8 432 aa9.2□□□□□ -0.94
ABCD4-220ENST00000553998 PARP14Q460N5 1801 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 IGKV6D-41A0A0C4DH26 115 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.19□□□□□ -0.94
ABCD4-220ENST00000553998 GOLIM4O00461 696 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 B4GALT4O60513 344 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 MBD4O95243 580 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 NDUFB10O96000 172 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 FDX1P10109 184 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 ATP2A2P16615 1042 aaKnown RBP9.19□□□□□ -0.94
ABCD4-220ENST00000553998 RASA1P20936 1047 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 CCL23P55773 120 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 BEX3Q00994 111 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 TNFAIP2Q03169 654 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 FSCN1Q16658 493 aaKnown RBP9.19□□□□□ -0.94
ABCD4-220ENST00000553998 LRRFIP1Q32MZ4 808 aaKnown RBP9.19□□□□□ -0.94
ABCD4-220ENST00000553998 SBK1Q52WX2 424 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 TMEM67Q5HYA8 995 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 AMOTL1Q8IY63 956 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 NUP88Q99567 741 aaPredicted RBP9.19□□□□□ -0.94
ABCD4-220ENST00000553998 TRPV6Q9H1D0 765 aa9.19□□□□□ -0.94
ABCD4-220ENST00000553998 SOWAHBA6NEL2 793 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 ASB14A6NK59 587 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 PI4K2BG5E9Z4 385 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 RFXAPO00287 272 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 GTPBP6O43824 516 aaPredicted RBP9.18□□□□□ -0.94
ABCD4-220ENST00000553998 ZEB2O60315 1214 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 PDE4AP27815 886 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 SLFNL1Q499Z3 407 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 TSHZ3Q63HK5 1081 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 IQSEC1Q6DN90 963 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 TAPT1Q6NXT6 567 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 GIMAP6Q6P9H5 292 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 CPXCR1Q8N123 301 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 KBTBD3Q8NAB2 608 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 MORC4Q8TE76 937 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 HLA-CQ95604 372 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.18□□□□□ -0.943e-7■■■□□ 15.9
ABCD4-220ENST00000553998 ALDH8A1Q9H2A2 487 aaPredicted RBP9.18□□□□□ -0.94
ABCD4-220ENST00000553998 RAVER2Q9HCJ3 691 aaKnown RBP9.18□□□□□ -0.94
ABCD4-220ENST00000553998 LMCD1Q9NZU5 365 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 ARPP21Q9UBL0 812 aaPredicted RBP9.18□□□□□ -0.94
ABCD4-220ENST00000553998 FEM1BQ9UK73 627 aa9.18□□□□□ -0.94
ABCD4-220ENST00000553998 EPOPA6NHQ4 379 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 DYNC1LI2O43237 492 aaPredicted RBP9.17□□□□□ -0.94
ABCD4-220ENST00000553998 LPXNO60711 386 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 CA3P07451 260 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 ZFYP08048 801 aaPredicted RBP9.17□□□□□ -0.94
ABCD4-220ENST00000553998 SUPT20HL2P0C7V6 817 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 SMPD1P17405 629 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 RFC2P35250 354 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 CNTN2Q02246 1040 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 TAP1Q03518 808 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 TTLL4Q14679 1199 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 ZSCAN25Q6NSZ9 544 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 TLK2Q86UE8 772 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 MICALL1Q8N3F8 863 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 GMCL1P1Q8NEA9 526 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 KHSRPQ92945 711 aaKnown RBP eCLIP9.17□□□□□ -0.94
ABCD4-220ENST00000553998 EVI5LQ96CN4 794 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 SCLYQ96I15 445 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 SLC9A7Q96T83 725 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 CLIP2Q9UDT6 1046 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 SLC4A4Q9Y6R1 1079 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 ZNFX1Q9P2E3 1918 aaKnown RBP9.17□□□□□ -0.94
ABCD4-220ENST00000553998 PLXNA1Q9UIW2 1896 aa9.17□□□□□ -0.94
ABCD4-220ENST00000553998 COL11A1P12107 1806 aaPredicted RBP9.17□□□□□ -0.94
ABCD4-220ENST00000553998 ZNF536O15090 1300 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 ZBBXA8MT70 800 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 RAD21O60216 631 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 PLA2G6O60733 806 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 SKIV2LQ15477 1246 aaKnown RBP9.16□□□□□ -0.94
ABCD4-220ENST00000553998 TKFCQ3LXA3 575 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 TTC22Q5TAA0 569 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 KIFC2Q96AC6 838 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 PUS7LQ9H0K6 701 aaKnown RBP9.16□□□□□ -0.94
ABCD4-220ENST00000553998 AP5M1Q9H0R1 490 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 ACAD9Q9H845 621 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 A1CFQ9NQ94 594 aaKnown RBP9.16□□□□□ -0.94
ABCD4-220ENST00000553998 MTMR4Q9NYA4 1195 aa9.16□□□□□ -0.94
ABCD4-220ENST00000553998 CTDP1Q9Y5B0 961 aaPredicted RBP9.16□□□□□ -0.94
ABCD4-220ENST00000553998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.15□□□□□ -0.94
ABCD4-220ENST00000553998 LOC102724159A0A0B4J2E5 919 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 RBM47A0AV96 593 aaKnown RBP9.15□□□□□ -0.94
ABCD4-220ENST00000553998 GSG1L2A8MUP6 293 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 PRR33A8MZF0 331 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 PITPNM1O00562 1244 aa9.15□□□□□ -0.94
ABCD4-220ENST00000553998 ARHGEF15O94989 841 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms