RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 STX8Q9UNK0 236 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 MTMR7Q9Y216 660 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 ELP1O95163 1332 aa10.47□□□□□ -0.73
TDP1-208ENST00000553989 CUL9Q8IWT3 2517 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 TSPY2A6NKD2 308 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 ARVCFO00192 962 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 ADCY6O43306 1168 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 FDX1P10109 184 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 ALAS1P13196 640 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 PDE4AP27815 886 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 GJA9P57773 515 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 BEX3Q00994 111 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 CNTN2Q02246 1040 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 TNFAIP2Q03169 654 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 PPARAQ07869 468 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 PPP4R3BQ5MIZ7 849 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 CCSAPQ6IQ19 270 aaPredicted RBP10.46□□□□□ -0.73
TDP1-208ENST00000553989 MFSD5Q6N075 450 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 FAM160B2Q86V87 743 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 NEDD1Q8NHV4 660 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 CHURC1Q8WUH1 139 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 MKL1Q969V6 931 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 SEC62Q99442 399 aaKnown RBP10.46□□□□□ -0.73
TDP1-208ENST00000553989 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.46□□□□□ -0.73
TDP1-208ENST00000553989 TBX21Q9UL17 535 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 TTC41PQ6P2S7 1318 aa10.46□□□□□ -0.73
TDP1-208ENST00000553989 PLIN4Q96Q06 1357 aa10.46□□□□□ -0.74
TDP1-208ENST00000553989 ASB14A6NK59 587 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 ZEB2O60315 1214 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 ACRP10323 421 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 CSF2RAP15509 400 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 MCCP23508 829 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 GRIN2CQ14957 1233 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 CCDC96Q2M329 555 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 PSRC1Q6PGN9 363 aaPredicted RBP10.45□□□□□ -0.74
TDP1-208ENST00000553989 KCTD1Q719H9 257 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.45□□□□□ -0.74
TDP1-208ENST00000553989 CENPQQ7L2Z9 268 aaPredicted RBP10.45□□□□□ -0.74
TDP1-208ENST00000553989 EEPD1Q7L9B9 569 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 TLK2Q86UE8 772 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 STAG1Q8WVM7 1258 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 PPM1EQ8WY54 764 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 FGD4Q96M96 766 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 AGBL1Q96MI9 1066 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 TRERF1Q96PN7 1200 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 GAS2L1Q99501 681 aaPredicted RBP10.45□□□□□ -0.74
TDP1-208ENST00000553989 BACH2Q9BYV9 841 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 AP5M1Q9H0R1 490 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 UPF3AQ9H1J1 476 aaKnown RBP10.45□□□□□ -0.74
TDP1-208ENST00000553989 MTIF3Q9H2K0 278 aaKnown RBP10.45□□□□□ -0.74
TDP1-208ENST00000553989 ZNF576Q9H609 170 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 A1CFQ9NQ94 594 aaKnown RBP10.45□□□□□ -0.74
TDP1-208ENST00000553989 TOMM22Q9NS69 142 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 WDR70Q9NW82 654 aa10.45□□□□□ -0.74
TDP1-208ENST00000553989 A0A0C4DFX4 3053 aa10.44□□□□□ -0.74
TDP1-208ENST00000553989 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.44□□□□□ -0.74
TDP1-208ENST00000553989 SNAP25P60880 206 aa10.44□□□□□ -0.74
TDP1-208ENST00000553989 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
TDP1-208ENST00000553989 TKFCQ3LXA3 575 aa10.44□□□□□ -0.74
TDP1-208ENST00000553989 CXCL17Q6UXB2 119 aa10.44□□□□□ -0.74
TDP1-208ENST00000553989 NSMFQ6X4W1 530 aa10.44□□□□□ -0.74
TDP1-208ENST00000553989 FBXO16Q8IX29 292 aaPredicted RBP10.44□□□□□ -0.74
TDP1-208ENST00000553989 FAM126BQ8IXS8 530 aa10.44□□□□□ -0.74
TDP1-208ENST00000553989 SYMPKQ92797 1274 aaKnown RBP10.44□□□□□ -0.74
TDP1-208ENST00000553989 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
TDP1-208ENST00000553989 CCPG1Q9ULG6 757 aa10.44□□□□□ -0.74
TDP1-208ENST00000553989 MCM3APO60318 1980 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 GRXCR1A8MXD5 290 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 DYNC1LI2O43237 492 aaPredicted RBP10.43□□□□□ -0.74
TDP1-208ENST00000553989 RANBP6O60518 1105 aaKnown RBP10.43□□□□□ -0.74
TDP1-208ENST00000553989 CABYRO75952 493 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 MX1P20591 662 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 CYP2C18P33260 490 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 CDK7P50613 346 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 ITGA7Q13683 1181 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 FSCN1Q16658 493 aaKnown RBP10.43□□□□□ -0.74
TDP1-208ENST00000553989 TMEM240Q5SV17 173 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 ZMYM1Q5SVZ6 1142 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 ZNF365Q70YC5 407 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 FAM133AQ8N9E0 248 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 CRBNQ96SW2 442 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 PBX4Q9BYU1 374 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 HIPK3Q9H422 1215 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 MSRAQ9UJ68 235 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 PRR12Q9ULL5 1215 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 PCDHB8Q9UN66 801 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 PCDHB13Q9Y5F0 798 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 UNC80Q8N2C7 3258 aa10.43□□□□□ -0.74
TDP1-208ENST00000553989 ZNF536O15090 1300 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 LAMA2P24043 3122 aaKnown RBP10.42□□□□□ -0.74
TDP1-208ENST00000553989 SOWAHBA6NEL2 793 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 NMT2O60551 498 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 SMPD1P17405 629 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 PBX2P40425 430 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 RAB30Q15771 203 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 MUM1L1Q5H9M0 696 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 RRP12Q5JTH9 1297 aaKnown RBP10.42□□□□□ -0.74
TDP1-208ENST00000553989 RCSD1Q6JBY9 416 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 KIAA1211Q6ZU35 1233 aa10.42□□□□□ -0.74
TDP1-208ENST00000553989 RASGRP2Q7LDG7 609 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms