RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 MFAP1P55081 439 aaKnown RBP8.24□□□□□ -1.09
ATXN3-223ENST00000553686 UBE3DQ7Z6J8 389 aa8.24□□□□□ -1.09
ATXN3-223ENST00000553686 RELL1Q8IUW5 271 aa8.24□□□□□ -1.09
ATXN3-223ENST00000553686 KCT2Q8NC54 265 aa8.24□□□□□ -1.09
ATXN3-223ENST00000553686 WNK3Q9BYP7 1800 aa8.24□□□□□ -1.09
ATXN3-223ENST00000553686 KAT6BQ8WYB5 2073 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 F6X3S4 739 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 DDNO94850 711 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-223ENST00000553686 WNT11O96014 354 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 ITPK1Q13572 414 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 MSMPQ1L6U9 139 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 WIPI1Q5MNZ9 446 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-223ENST00000553686 PNMA8AQ86V59 439 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-223ENST00000553686 TOP6BLQ8N6T0 577 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 PHC3Q8NDX5 983 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 CAPNS2Q96L46 248 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 WNT10AQ9GZT5 417 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 TAF1DQ9H5J8 278 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-223ENST00000553686 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
ATXN3-223ENST00000553686 ZC3H7BQ9UGR2 993 aaKnown RBP8.23□□□□□ -1.09
ATXN3-223ENST00000553686 TNRC6CQ9HCJ0 1690 aaKnown RBP8.22□□□□□ -1.09
ATXN3-223ENST00000553686 GFRA2O00451 464 aa8.22□□□□□ -1.09
ATXN3-223ENST00000553686 HOXC9P31274 260 aa8.22□□□□□ -1.09
ATXN3-223ENST00000553686 ETF1P62495 437 aaKnown RBP8.22□□□□□ -1.09
ATXN3-223ENST00000553686 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
ATXN3-223ENST00000553686 NBPF6Q5VWK0 638 aa8.22□□□□□ -1.09
ATXN3-223ENST00000553686 HDGFL2Q7Z4V5 671 aaPredicted RBP8.22□□□□□ -1.09
ATXN3-223ENST00000553686 CNTROBQ8N137 903 aa8.22□□□□□ -1.09
ATXN3-223ENST00000553686 NBPF4Q96M43 638 aa8.22□□□□□ -1.09
ATXN3-223ENST00000553686 KIAA1210Q9ULL0 1709 aa8.22□□□□□ -1.09
ATXN3-223ENST00000553686 PIK3C2AO00443 1686 aa8.21□□□□□ -1.09
ATXN3-223ENST00000553686 CYP27B1O15528 508 aa8.21□□□□□ -1.1
ATXN3-223ENST00000553686 SOX10P56693 466 aa8.21□□□□□ -1.1
ATXN3-223ENST00000553686 TRIM26Q12899 539 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-223ENST00000553686 HABP4Q5JVS0 413 aaKnown RBP8.21□□□□□ -1.1
ATXN3-223ENST00000553686 RSRP1Q9BUV0 290 aa8.21□□□□□ -1.1
ATXN3-223ENST00000553686 BCL11AQ9H165 835 aa8.21□□□□□ -1.1
ATXN3-223ENST00000553686 BSDC1Q9NW68 430 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-223ENST00000553686 ASAP1Q9ULH1 1129 aa8.21□□□□□ -1.1
ATXN3-223ENST00000553686 TUBGCP6Q96RT7 1819 aa8.21□□□□□ -1.1
ATXN3-223ENST00000553686 MAP3K19Q56UN5 1328 aa8.21□□□□□ -1.1
ATXN3-223ENST00000553686 LY75O60449 1722 aa8.2□□□□□ -1.1
ATXN3-223ENST00000553686 CD163L1Q9NR16 1453 aa8.2□□□□□ -1.1
ATXN3-223ENST00000553686 MINDY4BA8MYZ0 360 aa8.2□□□□□ -1.1
ATXN3-223ENST00000553686 H0YIN7 160 aa8.2□□□□□ -1.1
ATXN3-223ENST00000553686 PF4P02776 101 aa8.2□□□□□ -1.1
ATXN3-223ENST00000553686 ZNF16P17020 682 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-223ENST00000553686 GBP2P32456 591 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-223ENST00000553686 GRM1Q13255 1194 aa8.2□□□□□ -1.1
ATXN3-223ENST00000553686 CAMK2GQ13555 558 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-223ENST00000553686 FAM181AQ8N9Y4 354 aa8.2□□□□□ -1.1
ATXN3-223ENST00000553686 FBRSQ9HAH7 460 aa8.2□□□□□ -1.1
ATXN3-223ENST00000553686 CCDC39Q9UFE4 941 aa8.2□□□□□ -1.1
ATXN3-223ENST00000553686 LRIG2O94898 1065 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 TM4SF1P30408 202 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 GRK4P32298 578 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 GP2P55259 537 aaKnown RBP8.19□□□□□ -1.1
ATXN3-223ENST00000553686 LMNB2Q03252 620 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 DDR1Q08345 913 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 MRPL58Q14197 206 aaKnown RBP8.19□□□□□ -1.1
ATXN3-223ENST00000553686 DIEXFQ68CQ4 756 aaKnown RBP8.19□□□□□ -1.1
ATXN3-223ENST00000553686 CCDC84Q86UT8 332 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-223ENST00000553686 HID1Q8IV36 788 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 TMEM74Q96NL1 305 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 DDX21Q9NR30 783 aaKnown RBP eCLIP8.19□□□□□ -1.1
ATXN3-223ENST00000553686 HACL1Q9UJ83 578 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 ANGEL1Q9UNK9 670 aaKnown RBP8.19□□□□□ -1.1
ATXN3-223ENST00000553686 C4BP0C0L5 1744 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 MEGF6O75095 1541 aa8.19□□□□□ -1.1
ATXN3-223ENST00000553686 POLRMTO00411 1230 aaKnown RBP8.18□□□□□ -1.1
ATXN3-223ENST00000553686 PRNPP04156 253 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 RPL6Q02878 288 aaKnown RBP8.18□□□□□ -1.1
ATXN3-223ENST00000553686 PWP1Q13610 501 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 SLBPQ14493 270 aaKnown RBP eCLIP8.18□□□□□ -1.1
ATXN3-223ENST00000553686 NKG7Q16617 165 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 CYP4F22Q6NT55 531 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 BNC2Q6ZN30 1099 aaPredicted RBP8.18□□□□□ -1.1
ATXN3-223ENST00000553686 ARMCX6Q7L4S7 300 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 FAM214BQ7L5A3 538 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 C2CD5Q86YS7 1000 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 USHBP1Q8N6Y0 703 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 COG3Q96JB2 828 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 FOXQ1Q9C009 403 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 TERF2IPQ9NYB0 399 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 TACC3Q9Y6A5 838 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 OAS3Q9Y6K5 1087 aaKnown RBP8.18□□□□□ -1.1
ATXN3-223ENST00000553686 CNTNAP4Q9C0A0 1308 aa8.18□□□□□ -1.1
ATXN3-223ENST00000553686 SMG6Q86US8 1419 aaKnown RBP8.18□□□□□ -1.1
ATXN3-223ENST00000553686 EPHX2P34913 555 aa8.17□□□□□ -1.1
ATXN3-223ENST00000553686 HEXIM2Q96MH2 286 aaKnown RBP8.17□□□□□ -1.1
ATXN3-223ENST00000553686 TAOK3Q9H2K8 898 aa8.17□□□□□ -1.1
ATXN3-223ENST00000553686 LTBP3Q9NS15 1303 aa8.17□□□□□ -1.1
ATXN3-223ENST00000553686 OXCT1P55809 520 aa8.16□□□□□ -1.1
ATXN3-223ENST00000553686 SOGA3Q5TF21 947 aa8.16□□□□□ -1.1
ATXN3-223ENST00000553686 USP54Q70EL1 1684 aa8.16□□□□□ -1.1
ATXN3-223ENST00000553686 PLD6Q8N2A8 252 aaKnown RBP8.16□□□□□ -1.1
ATXN3-223ENST00000553686 NETO1Q8TDF5 533 aa8.16□□□□□ -1.1
ATXN3-223ENST00000553686 ZNF622Q969S3 477 aaKnown RBP eCLIP8.16□□□□□ -1.1
ATXN3-223ENST00000553686 USP42Q9H9J4 1324 aaKnown RBP8.16□□□□□ -1.1
ATXN3-223ENST00000553686 COPRSQ9NQ92 184 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms