RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 ZNF536O15090 1300 aa15.73■□□□□ 0.11
APEX1-205ENST00000553555 TRAPPC10P48553 1259 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 CLK2P49760 499 aaKnown RBP15.72■□□□□ 0.11
APEX1-205ENST00000553555 UBE2HP62256 183 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 SLC39A14Q15043 492 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 PTPAQ15257 358 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 JAKMIP3Q5VZ66 844 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 CST9Q5W186 159 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 ADAMTS5Q9UNA0 930 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 PCDHB6Q9Y5E3 794 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 ZBED4O75132 1171 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 ICAM1P05362 532 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 ATP2B1P20020 1258 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 GJA5P36382 358 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 TREML2Q5T2D2 321 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 GADL1Q6ZQY3 521 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 ATG4CQ96DT6 458 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 PGBD1Q96JS3 809 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 GPBP1L1Q9HC44 474 aaPredicted RBP15.72■□□□□ 0.11
APEX1-205ENST00000553555 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.72■□□□□ 0.11
APEX1-205ENST00000553555 TMEM260Q9NX78 707 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 HOXC10Q9NYD6 342 aa15.72■□□□□ 0.11
APEX1-205ENST00000553555 DDX49Q9Y6V7 483 aaKnown RBP15.72■□□□□ 0.11
APEX1-205ENST00000553555 ABCB11O95342 1321 aa15.71■□□□□ 0.11
APEX1-205ENST00000553555 VWA5AO00534 786 aa15.71■□□□□ 0.11
APEX1-205ENST00000553555 OPLAHO14841 1288 aa15.71■□□□□ 0.11
APEX1-205ENST00000553555 SPTLC2O15270 562 aa15.71■□□□□ 0.11
APEX1-205ENST00000553555 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
APEX1-205ENST00000553555 HOXA7P31268 230 aaPredicted RBP15.71■□□□□ 0.11
APEX1-205ENST00000553555 NONOQ15233 471 aaKnown RBP eCLIP15.71■□□□□ 0.11
APEX1-205ENST00000553555 UBE2SQ16763 222 aa15.71■□□□□ 0.11
APEX1-205ENST00000553555 TTC38Q5R3I4 469 aa15.71■□□□□ 0.11
APEX1-205ENST00000553555 GPT2Q8TD30 523 aa15.71■□□□□ 0.11
APEX1-205ENST00000553555 KCNG4Q8TDN1 519 aa15.71■□□□□ 0.11
APEX1-205ENST00000553555 AGBL1Q96MI9 1066 aa15.71■□□□□ 0.11
APEX1-205ENST00000553555 MRPL11Q9Y3B7 192 aaKnown RBP15.71■□□□□ 0.11
APEX1-205ENST00000553555 MYPNQ86TC9 1320 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 WNT7AO00755 349 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 MEIS2O14770 477 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 MOGSQ13724 837 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 INF2Q27J81 1249 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 USP17L6PQ6QN14 398 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 TEX2Q8IWB9 1127 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 REPS2Q8NFH8 660 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 WNK4Q96J92 1243 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 RAVER2Q9HCJ3 691 aaKnown RBP15.7■□□□□ 0.1
APEX1-205ENST00000553555 PNMA2Q9UL42 364 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 CCPG1Q9ULG6 757 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 PCDHA7Q9UN72 937 aa15.7■□□□□ 0.1
APEX1-205ENST00000553555 CTDP1Q9Y5B0 961 aaPredicted RBP15.7■□□□□ 0.1
APEX1-205ENST00000553555 KIF3CO14782 793 aa15.69■□□□□ 0.1
APEX1-205ENST00000553555 PPP6R2O75170 966 aa15.69■□□□□ 0.1
APEX1-205ENST00000553555 MBD3O95983 291 aa15.69■□□□□ 0.1
APEX1-205ENST00000553555 SNAPC2Q13487 334 aa15.69■□□□□ 0.1
APEX1-205ENST00000553555 ZNF174Q15697 407 aa15.69■□□□□ 0.1
APEX1-205ENST00000553555 KLHL40Q2TBA0 621 aa15.69■□□□□ 0.1
APEX1-205ENST00000553555 MCTP2Q6DN12 878 aa15.69■□□□□ 0.1
APEX1-205ENST00000553555 FASTKD5Q7L8L6 764 aaKnown RBP15.69■□□□□ 0.1
APEX1-205ENST00000553555 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
APEX1-205ENST00000553555 CEP131Q9UPN4 1083 aa15.69■□□□□ 0.1
APEX1-205ENST00000553555 RBBP6Q7Z6E9 1792 aaKnown RBP15.68■□□□□ 0.1
APEX1-205ENST00000553555 GOLGA6L4A6NEF3 574 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 SPDYE16A6NNV3 312 aaPredicted RBP15.68■□□□□ 0.1
APEX1-205ENST00000553555 PIK3CDO00329 1044 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 ME1P48163 572 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 TBCKQ8TEA7 893 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 AGTPBP1Q9UPW5 1226 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 MORC2Q9Y6X9 1032 aaPredicted RBP15.68■□□□□ 0.1
APEX1-205ENST00000553555 PASKQ96RG2 1323 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 BMP15O95972 392 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 MARCKSP29966 332 aaPredicted RBP15.68■□□□□ 0.1
APEX1-205ENST00000553555 OAZ1P54368 228 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 AP3B2Q13367 1082 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 TPRNQ4KMQ1 711 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 ADALQ6DHV7 355 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 GPAT2Q6NUI2 795 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 JMYQ8N9B5 988 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 TBC1D5Q92609 795 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 A0A0G2JMZ2 1700 aa15.68■□□□□ 0.1
APEX1-205ENST00000553555 ATP2A1O14983 1001 aa15.67■□□□□ 0.1
APEX1-205ENST00000553555 FOSP01100 380 aaPredicted RBP15.67■□□□□ 0.1
APEX1-205ENST00000553555 ALAS1P13196 640 aa15.67■□□□□ 0.1
APEX1-205ENST00000553555 NEK8Q86SG6 692 aa15.67■□□□□ 0.1
APEX1-205ENST00000553555 CLEC4DQ8WXI8 215 aa15.67■□□□□ 0.1
APEX1-205ENST00000553555 P2RX7Q99572 595 aaKnown RBP15.67■□□□□ 0.1
APEX1-205ENST00000553555 ZNF214Q9UL59 606 aaPredicted RBP15.67■□□□□ 0.1
APEX1-205ENST00000553555 GCOM1H8Y6P7 765 aaPredicted RBP15.66■□□□□ 0.1
APEX1-205ENST00000553555 EDIL3O43854 480 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 CFBP00751 764 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 POLR2MP0CAP2 368 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 MCM7P33993 719 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 HUNKP57058 714 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 PTGDRQ13258 359 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 PABPC4Q13310 644 aaKnown RBP eCLIP15.66■□□□□ 0.12e-8■■■□□ 18.9
APEX1-205ENST00000553555 TMEM132BQ14DG7 1078 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
APEX1-205ENST00000553555 SPRYD7Q5W111 196 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 C4orf32Q8N8J7 132 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 MS4A4AQ96JQ5 239 aa15.66■□□□□ 0.1
APEX1-205ENST00000553555 ASCC2Q9H1I8 757 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms