RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 SMARCC2Q8TAQ2 1214 aa11.26□□□□□ -0.61
TMEM260-204ENST00000553335 WASF1Q92558 559 aa11.26□□□□□ -0.61
TMEM260-204ENST00000553335 PHKBQ93100 1093 aa11.26□□□□□ -0.61
TMEM260-204ENST00000553335 PIGSQ96S52 555 aa11.26□□□□□ -0.61
TMEM260-204ENST00000553335 PARK7Q99497 189 aaKnown RBP11.26□□□□□ -0.61
TMEM260-204ENST00000553335 ASCC2Q9H1I8 757 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-204ENST00000553335 CPVLQ9H3G5 476 aa11.26□□□□□ -0.61
TMEM260-204ENST00000553335 JMJD4Q9H9V9 463 aa11.26□□□□□ -0.61
TMEM260-204ENST00000553335 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
TMEM260-204ENST00000553335 PNMA2Q9UL42 364 aa11.26□□□□□ -0.61
TMEM260-204ENST00000553335 THSD7BQ9C0I4 1608 aa11.26□□□□□ -0.61
TMEM260-204ENST00000553335 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
TMEM260-204ENST00000553335 PNMA6FA0A0J9YX94 578 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 PTPDC1A2A3K4 754 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 ZBTB5O15062 677 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 GPR37O15354 613 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 CYTH3O43739 400 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 AOC2O75106 756 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 CTDNEP1O95476 244 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 VEGFBP49765 207 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 HERVK_113P62684 666 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 FUT2Q10981 343 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 CDC37Q16543 378 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-204ENST00000553335 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 FAM43AQ8N2R8 423 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-204ENST00000553335 MB21D1Q8N884 522 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 SMCR8Q8TEV9 937 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-204ENST00000553335 ATG4CQ96DT6 458 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 MTMR8Q96EF0 704 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 P2RX7Q99572 595 aaKnown RBP11.25□□□□□ -0.61
TMEM260-204ENST00000553335 PTPN18Q99952 460 aa11.25□□□□□ -0.61
TMEM260-204ENST00000553335 RANBP17Q9H2T7 1088 aaKnown RBP11.25□□□□□ -0.61
TMEM260-204ENST00000553335 ORC3Q9UBD5 711 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-204ENST00000553335 V9GY48 417 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-204ENST00000553335 RBBP6Q7Z6E9 1792 aaKnown RBP11.24□□□□□ -0.61
TMEM260-204ENST00000553335 IGF2BP3O00425 579 aaKnown RBP eCLIP11.24□□□□□ -0.61
TMEM260-204ENST00000553335 VWA5AO00534 786 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 XBP1P17861 261 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 GJB2P29033 226 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 GCLCP48506 637 aaPredicted RBP11.24□□□□□ -0.61
TMEM260-204ENST00000553335 OAZ1P54368 228 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 TAF1CQ15572 869 aaPredicted RBP11.24□□□□□ -0.61
TMEM260-204ENST00000553335 PFKFB3Q16875 520 aaPredicted RBP11.24□□□□□ -0.61
TMEM260-204ENST00000553335 QRICH1Q2TAL8 776 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 PIBF1Q8WXW3 757 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 DDX11Q96FC9 970 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 AMNQ9BXJ7 453 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 SLC38A10Q9HBR0 1119 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 ZFYVE28Q9HCC9 887 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 ADAMTS5Q9UNA0 930 aa11.24□□□□□ -0.61
TMEM260-204ENST00000553335 JAK2O60674 1132 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 ICAM1P05362 532 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 CYP2C8P10632 490 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 SCG2P13521 617 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 CCDC174Q6PII3 467 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 FBXO11Q86XK2 927 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 CCDC12Q8WUD4 166 aaPredicted RBP11.23□□□□□ -0.61
TMEM260-204ENST00000553335 ZIC5Q96T25 663 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 PAGR1Q9BTK6 254 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 METRNQ9UJH8 293 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 RABGAP1Q9Y3P9 1069 aa11.23□□□□□ -0.61
TMEM260-204ENST00000553335 PCNTO95613 3336 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 hCG_1642624A0A1W2PR95 340 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 ATP2A1O14983 1001 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 TRIM66O15016 1216 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 EVI5O60447 810 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 ABCB11O95342 1321 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 FDPSP14324 419 aaKnown RBP11.22□□□□□ -0.61
TMEM260-204ENST00000553335 PDCP20941 246 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 SNAP25P60880 206 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 TRIM29Q14134 588 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 PLS1Q14651 629 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 COL13A1Q5TAT6 717 aaPredicted RBP11.22□□□□□ -0.61
TMEM260-204ENST00000553335 CPXCR1Q8N123 301 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 CCDC148Q8NFR7 591 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 IPO9Q96P70 1041 aaKnown RBP11.22□□□□□ -0.61
TMEM260-204ENST00000553335 ALG1Q9BT22 464 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 CWC22Q9HCG8 908 aaKnown RBP11.22□□□□□ -0.61
TMEM260-204ENST00000553335 RAVER2Q9HCJ3 691 aaKnown RBP11.22□□□□□ -0.61
TMEM260-204ENST00000553335 SH3GLB2Q9NR46 395 aa11.22□□□□□ -0.61
TMEM260-204ENST00000553335 ZNF536O15090 1300 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 CA12O43570 354 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.61
TMEM260-204ENST00000553335 COPB2P35606 906 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 STAT3P40763 770 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 NAPAP54920 295 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 CCNA1P78396 465 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 TMEM132BQ14DG7 1078 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 PKN1Q16512 942 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 TKFCQ3LXA3 575 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 USH1GQ495M9 461 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 LARP1BQ659C4 914 aaKnown RBP11.21□□□□□ -0.61
TMEM260-204ENST00000553335 SNRNP48Q6IEG0 339 aaKnown RBP11.21□□□□□ -0.61
TMEM260-204ENST00000553335 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
TMEM260-204ENST00000553335 HEATR3Q7Z4Q2 680 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms