RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 SLC14A2Q15849 920 aa7.69□□□□□ -1.18
ATXN3-218ENST00000553309 CWF19L1Q69YN2 538 aaKnown RBP7.69□□□□□ -1.18
ATXN3-218ENST00000553309 ANAPC16Q96DE5 110 aa7.69□□□□□ -1.18
ATXN3-218ENST00000553309 RNF32Q9H0A6 362 aa7.69□□□□□ -1.18
ATXN3-218ENST00000553309 PHAXQ9H814 394 aaKnown RBP7.69□□□□□ -1.18
ATXN3-218ENST00000553309 STRIP2Q9ULQ0 834 aa7.69□□□□□ -1.18
ATXN3-218ENST00000553309 ALKQ9UM73 1620 aa7.69□□□□□ -1.18
ATXN3-218ENST00000553309 TRAPPC8Q9Y2L5 1435 aa7.69□□□□□ -1.18
ATXN3-218ENST00000553309 MAGI2Q86UL8 1455 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 PSPNO60542 156 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 CASP7P55210 303 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 SLC7A5Q01650 507 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 MESP2Q0VG99 397 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 GNL2Q13823 731 aaKnown RBP7.68□□□□□ -1.18
ATXN3-218ENST00000553309 SNX17Q15036 470 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 CRTC3Q6UUV7 619 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 KSR1Q8IVT5 923 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 MAP6Q96JE9 813 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 DIRC2Q96SL1 478 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 KRTAP4-12Q9BQ66 201 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 CDADC1Q9BWV3 514 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 GPR160Q9UJ42 338 aa7.68□□□□□ -1.18
ATXN3-218ENST00000553309 NOTOA8MTQ0 251 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 E9PSI1 815 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 USP2O75604 605 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-218ENST00000553309 ZNF205O95201 554 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 C8AP07357 584 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 ITGA4P13612 1032 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 KIR2DL1P43626 348 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-218ENST00000553309 KIR2DL2P43627 348 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-218ENST00000553309 CEP128Q6ZU80 1094 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 FIBCD1Q8N539 461 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 FAM169BQ8N8A8 192 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 HHIPL1Q96JK4 782 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 FAM84AQ96KN4 292 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 NSUN3Q9H649 340 aaKnown RBP7.67□□□□□ -1.18
ATXN3-218ENST00000553309 FHOD1Q9Y613 1164 aa7.67□□□□□ -1.18
ATXN3-218ENST00000553309 A0A087WZG4 1122 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 NOP2P46087 812 aaKnown RBP7.66□□□□□ -1.18
ATXN3-218ENST00000553309 HEATR6Q6AI08 1181 aaKnown RBP7.66□□□□□ -1.18
ATXN3-218ENST00000553309 ADAT2Q7Z6V5 191 aaKnown RBP7.66□□□□□ -1.18
ATXN3-218ENST00000553309 SIRT2Q8IXJ6 389 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 HAUS7Q99871 368 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 KCNK12Q9HB15 430 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 CWC22Q9HCG8 908 aaKnown RBP7.66□□□□□ -1.18
ATXN3-218ENST00000553309 AP5S1Q9NUS5 200 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 TNFRSF10DQ9UBN6 386 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 DIS3Q9Y2L1 958 aaKnown RBP7.66□□□□□ -1.18
ATXN3-218ENST00000553309 MRVI1Q9Y6F6 885 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 SCAPERQ9BY12 1400 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 GOLGA3Q08378 1498 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 CFAP74Q9C0B2 1584 aa7.66□□□□□ -1.18
ATXN3-218ENST00000553309 H0Y8X5 98 aa7.65□□□□□ -1.18
ATXN3-218ENST00000553309 CBFA2T2O43439 604 aa7.65□□□□□ -1.18
ATXN3-218ENST00000553309 SSBP05455 408 aaKnown RBP eCLIP7.65□□□□□ -1.18
ATXN3-218ENST00000553309 GSTM1P09488 218 aa7.65□□□□□ -1.18
ATXN3-218ENST00000553309 YBX3P16989 372 aaKnown RBP eCLIP7.65□□□□□ -1.18
ATXN3-218ENST00000553309 ENDOUP21128 410 aaKnown RBP7.65□□□□□ -1.18
ATXN3-218ENST00000553309 GALK1P51570 392 aa7.65□□□□□ -1.18
ATXN3-218ENST00000553309 RTP1P59025 263 aa7.65□□□□□ -1.18
ATXN3-218ENST00000553309 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
ATXN3-218ENST00000553309 SHISA4Q96DD7 197 aa7.65□□□□□ -1.18
ATXN3-218ENST00000553309 FCRL2Q96LA5 508 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-218ENST00000553309 SLC38A3Q99624 504 aa7.65□□□□□ -1.18
ATXN3-218ENST00000553309 SLC12A9Q9BXP2 914 aa7.65□□□□□ -1.18
ATXN3-218ENST00000553309 NOL6Q9H6R4 1146 aaKnown RBP7.65□□□□□ -1.18
ATXN3-218ENST00000553309 DCP1AQ9NPI6 582 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-218ENST00000553309 YBX2Q9Y2T7 364 aaKnown RBP7.65□□□□□ -1.18
ATXN3-218ENST00000553309 SF3B6Q9Y3B4 125 aaKnown RBP7.65□□□□□ -1.18
ATXN3-218ENST00000553309 SRCAPQ6ZRS2 3230 aa7.65□□□□□ -1.19
ATXN3-218ENST00000553309 RAPGEF2Q9Y4G8 1499 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 FADS2P1A8MWK0 482 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 NRDCO43847 1150 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 PPP2R5DQ14738 602 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 ZNF124Q15973 351 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 RTP2Q5QGT7 225 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 KIAA1211LQ6NV74 962 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 VHLLQ6RSH7 139 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 KLHL6Q8WZ60 621 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 FGD4Q96M96 766 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 SLC6A17Q9H1V8 727 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 WHRNQ9P202 907 aa7.64□□□□□ -1.19
ATXN3-218ENST00000553309 CPS1P31327 1500 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 TCOF1Q13428 1488 aaKnown RBP7.63□□□□□ -1.19
ATXN3-218ENST00000553309 PTPRKQ15262 1439 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 PPM1BO75688 479 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 EPHX1P07099 455 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 PKN1Q16512 942 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 SYDE1Q6ZW31 735 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-218ENST00000553309 NLRX1Q86UT6 975 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 FBXO15Q8NCQ5 510 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-218ENST00000553309 TMEM52Q8NDY8 209 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 ADCY4Q8NFM4 1077 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 INTS4Q96HW7 963 aaKnown RBP7.63□□□□□ -1.19
ATXN3-218ENST00000553309 ZDHHC15Q96MV8 337 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 KLHL25Q9H0H3 589 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 GBP3Q9H0R5 595 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 EPB41L4BQ9H329 900 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 ERVK13-1Q9NX77 482 aa7.63□□□□□ -1.19
ATXN3-218ENST00000553309 SHANK2Q9UPX8 1470 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms