RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 ZNF513Q8N8E2 541 aaPredicted RBP7.56□□□□□ -1.2
ATXN3-217ENST00000553287 NUP43Q8NFH3 380 aa7.56□□□□□ -1.2
ATXN3-217ENST00000553287 ZNF408Q9H9D4 720 aa7.56□□□□□ -1.2
ATXN3-217ENST00000553287 IMPACTQ9P2X3 320 aa7.56□□□□□ -1.2
ATXN3-217ENST00000553287 APEX2Q9UBZ4 518 aa7.56□□□□□ -1.2
ATXN3-217ENST00000553287 MYOCOSA0A1B0GUC4 107 aa7.55□□□□□ -1.2
ATXN3-217ENST00000553287 ETV2O00321 342 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-217ENST00000553287 NAT2P11245 290 aa7.55□□□□□ -1.2
ATXN3-217ENST00000553287 C6orf15Q6UXA7 325 aaPredicted RBP7.55□□□□□ -1.2
ATXN3-217ENST00000553287 CYP2R1Q6VVX0 501 aa7.55□□□□□ -1.2
ATXN3-217ENST00000553287 FAM178BQ8IXR5 827 aa7.55□□□□□ -1.2
ATXN3-217ENST00000553287 PPP1R14AQ96A00 147 aa7.55□□□□□ -1.2
ATXN3-217ENST00000553287 MCOLN1Q9GZU1 580 aa7.55□□□□□ -1.2
ATXN3-217ENST00000553287 C2orf71A6NGG8 1288 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 STXBP3O00186 592 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
ATXN3-217ENST00000553287 PEX10O60683 326 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 DDAH1O94760 285 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 TSPAN15O95858 294 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 KRT1P04264 644 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 ZNF143P52747 638 aaPredicted RBP7.54□□□□□ -1.2
ATXN3-217ENST00000553287 MVKQ03426 396 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 GRB10Q13322 594 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 FXNQ16595 210 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 ANKLE2Q86XL3 938 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 BVESQ8NE79 360 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 GMLQ99445 158 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 EMC9Q9Y3B6 208 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 R3HCC1Q9Y3T6 440 aaKnown RBP7.54□□□□□ -1.2
ATXN3-217ENST00000553287 SHROOM4Q9ULL8 1493 aa7.54□□□□□ -1.2
ATXN3-217ENST00000553287 KCNH1O95259 989 aa7.53□□□□□ -1.2
ATXN3-217ENST00000553287 MPOP05164 745 aa7.53□□□□□ -1.2
ATXN3-217ENST00000553287 SEPHS1P49903 392 aa7.53□□□□□ -1.2
ATXN3-217ENST00000553287 ERVFRD-1P60508 538 aa7.53□□□□□ -1.2
ATXN3-217ENST00000553287 FZD5Q13467 585 aa7.53□□□□□ -1.2
ATXN3-217ENST00000553287 RCSD1Q6JBY9 416 aa7.53□□□□□ -1.2
ATXN3-217ENST00000553287 ATG14Q6ZNE5 492 aa7.53□□□□□ -1.2
ATXN3-217ENST00000553287 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
ATXN3-217ENST00000553287 MICAL1Q8TDZ2 1067 aa7.53□□□□□ -1.2
ATXN3-217ENST00000553287 TEX51A0A1B0GUA7 166 aa7.52□□□□□ -1.21
ATXN3-217ENST00000553287 B2RBV5 119 aa7.52□□□□□ -1.21
ATXN3-217ENST00000553287 MSL3P1P0C860 447 aa7.52□□□□□ -1.21
ATXN3-217ENST00000553287 GLDCP23378 1020 aa7.52□□□□□ -1.21
ATXN3-217ENST00000553287 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
ATXN3-217ENST00000553287 SV2CQ496J9 727 aa7.52□□□□□ -1.21
ATXN3-217ENST00000553287 POMZP3Q6PJE2 187 aa7.52□□□□□ -1.21
ATXN3-217ENST00000553287 SGPP1Q9BX95 441 aa7.52□□□□□ -1.21
ATXN3-217ENST00000553287 BACE2Q9Y5Z0 518 aa7.52□□□□□ -1.21
ATXN3-217ENST00000553287 A0A1W2PQJ5 194 aa7.51□□□□□ -1.21
ATXN3-217ENST00000553287 TCAF2A6NFQ2 919 aa7.51□□□□□ -1.21
ATXN3-217ENST00000553287 L1CAMP32004 1257 aa7.51□□□□□ -1.21
ATXN3-217ENST00000553287 YBX1P67809 324 aaKnown RBP7.51□□□□□ -1.21
ATXN3-217ENST00000553287 DLG4P78352 724 aa7.51□□□□□ -1.21
ATXN3-217ENST00000553287 RAB3GAP1Q15042 981 aa7.51□□□□□ -1.21
ATXN3-217ENST00000553287 ANKS3Q6ZW76 656 aa7.51□□□□□ -1.21
ATXN3-217ENST00000553287 CRACR2BQ8N4Y2 399 aaPredicted RBP7.51□□□□□ -1.21
ATXN3-217ENST00000553287 NLGN2Q8NFZ4 835 aa7.51□□□□□ -1.21
ATXN3-217ENST00000553287 LGR4Q9BXB1 951 aa7.51□□□□□ -1.21
ATXN3-217ENST00000553287 SIRT5Q9NXA8 310 aa7.51□□□□□ -1.21
ATXN3-217ENST00000553287 SMG5Q9UPR3 1016 aaKnown RBP7.51□□□□□ -1.21
ATXN3-217ENST00000553287 ZCCHC6Q5VYS8 1495 aaKnown RBP7.5□□□□□ -1.21
ATXN3-217ENST00000553287 NPIPB6E9PJ23 425 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 ABLIM1O14639 778 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 SEMA7AO75326 666 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 MED14OSP0DP75 135 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 VIPR1P32241 457 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 ZC3H6P61129 1189 aaKnown RBP7.5□□□□□ -1.21
ATXN3-217ENST00000553287 JAG1P78504 1218 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 CPNE8Q86YQ8 564 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 MRGPRX3Q96LB0 322 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 GPRC5CQ9NQ84 441 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 PDLIM7Q9NR12 457 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 ST7Q9NRC1 585 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 KLHL14Q9P2G3 628 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 LRP2BPQ9P2M1 347 aa7.5□□□□□ -1.21
ATXN3-217ENST00000553287 NPHP3-ACAD11A0A0J9YXS1 232 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 NUDT19A8MXV4 375 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 HRKO00198 91 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 PAMP19021 973 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 NAALADL2Q58DX5 795 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 GTF2IRD2BQ6EKJ0 949 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 GTF2IRD2Q86UP8 949 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 CILP2Q8IUL8 1156 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 TRIM59Q8IWR1 403 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 HNRNPLLQ8WVV9 542 aaKnown RBP7.49□□□□□ -1.21
ATXN3-217ENST00000553287 TOX2Q96NM4 488 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 TNFRSF12AQ9NP84 129 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 CYP26B1Q9NR63 512 aa7.49□□□□□ -1.21
ATXN3-217ENST00000553287 SUSD5O60279 629 aa7.48□□□□□ -1.21
ATXN3-217ENST00000553287 GJB6O95452 261 aa7.48□□□□□ -1.21
ATXN3-217ENST00000553287 ITGAVP06756 1048 aa7.48□□□□□ -1.21
ATXN3-217ENST00000553287 TACR1P25103 407 aa7.48□□□□□ -1.21
ATXN3-217ENST00000553287 CFPP27918 469 aa7.48□□□□□ -1.21
ATXN3-217ENST00000553287 SCRN1Q12765 414 aa7.48□□□□□ -1.21
ATXN3-217ENST00000553287 CBX2Q14781 532 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-217ENST00000553287 KCNA10Q16322 511 aa7.48□□□□□ -1.21
ATXN3-217ENST00000553287 OLFML2BQ68BL8 750 aa7.48□□□□□ -1.21
ATXN3-217ENST00000553287 BICRALQ6AI39 1079 aa7.48□□□□□ -1.21
ATXN3-217ENST00000553287 MRM1Q6IN84 353 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms