RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ABHD16BQ9H3Z7 469 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 TMEM134Q9H6X4 195 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 SUGCTQ9HAC7 445 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 FAM86C1Q9NVL1 165 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 MUTYHQ9UIF7 546 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 PLXNB2O15031 1838 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 MYH3P11055 1940 aa6.33□□□□□ -1.4
CKAP4-203ENST00000553039 TPRP12270 2363 aaKnown RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 PDS5AQ29RF7 1337 aaKnown RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 PKD1L2Q7Z442 2459 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 H0Y858 1186 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 H3BQ06 376 aaPredicted RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 APAF1O14727 1248 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 KDM4AO75164 1064 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 BAIAP3O94812 1187 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 PGK2P07205 417 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 STAT3P40763 770 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 ERVK-21P61565 698 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 JAG1P78504 1218 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 ACVR2BQ13705 512 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 ELOAQ14241 798 aaKnown RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 PUM1Q14671 1186 aaKnown RBP eCLIP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 ABCB5Q2M3G0 1257 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 CERKLQ49MI3 558 aaPredicted RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 CCDC102BQ68D86 513 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 MCTP2Q6DN12 878 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 MAMDC4Q6UXC1 1216 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 NOL8Q76FK4 1167 aaKnown RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 PABPC5Q96DU9 382 aaKnown RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 RAD9AQ99638 391 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 FSD1Q9BTV5 496 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 ADAM33Q9BZ11 813 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 TANGO6Q9C0B7 1094 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 AP5M1Q9H0R1 490 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 UPF3AQ9H1J1 476 aaKnown RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 BICC1Q9H694 974 aaKnown RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 TLR9Q9NR96 1032 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 RAI14Q9P0K7 980 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 LRP2BPQ9P2M1 347 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 TFIP11Q9UBB9 837 aaKnown RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 ZHX1Q9UKY1 873 aaPredicted RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 MAFBQ9Y5Q3 323 aaPredicted RBP6.32□□□□□ -1.4
CKAP4-203ENST00000553039 FAM186AA6NE01 2351 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 CACNA1HO95180 2353 aa6.32□□□□□ -1.4
CKAP4-203ENST00000553039 DNAH12Q6ZR08 3092 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 PRR23AA6NEV1 266 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 DDX11L8A8MPP1 907 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 FLOT1O75955 427 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 SNAI1O95863 264 aaPredicted RBP6.31□□□□□ -1.4
CKAP4-203ENST00000553039 NBPF7P0C2Y1 421 aaPredicted RBP6.31□□□□□ -1.4
CKAP4-203ENST00000553039 NBL1P41271 181 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 PHKA1P46020 1223 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 PPP4CP60510 307 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 NKX3-2P78367 333 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 ZXDAP98168 799 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 VAC14Q08AM6 782 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 SMAD2Q15796 467 aaKnown RBP6.31□□□□□ -1.4
CKAP4-203ENST00000553039 TIGD5Q53EQ6 642 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 TATDN1Q6P1N9 297 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 ASCL5Q7RTU5 278 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 TTC6Q86TZ1 520 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 RIOX2Q8IUF8 465 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 ADSSL1Q8N142 457 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 TGFBRAP1Q8WUH2 860 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 NSUN4Q96CB9 384 aaKnown RBP6.31□□□□□ -1.4
CKAP4-203ENST00000553039 MRPL38Q96DV4 380 aaKnown RBP6.31□□□□□ -1.4
CKAP4-203ENST00000553039 SCLYQ96I15 445 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 KAZALD1Q96I82 304 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 AGBL1Q96MI9 1066 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 TRPV6Q9H1D0 765 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 PALD1Q9ULE6 856 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 HDAC5Q9UQL6 1122 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 AKAP2Q9Y2D5 859 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 RFX7Q2KHR2 1363 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 ROBO3Q96MS0 1386 aa6.31□□□□□ -1.4
CKAP4-203ENST00000553039 TNKSO95271 1327 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 SPEF2Q9C093 1822 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 CARNS1A5YM72 827 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 STXBP3O00186 592 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 HOXA2O43364 376 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 EFCAB14O75071 495 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 VAMP4O75379 141 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 CIAO1O76071 339 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 PARNO95453 639 aaKnown RBP6.3□□□□□ -1.4
CKAP4-203ENST00000553039 SEC24BO95487 1268 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 IL15P40933 162 aaPredicted RBP6.3□□□□□ -1.4
CKAP4-203ENST00000553039 CTDSPL2Q05D32 466 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 SIGLEC14Q08ET2 396 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 BFSP2Q13515 415 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 MVPQ14764 893 aaKnown RBP6.3□□□□□ -1.4
CKAP4-203ENST00000553039 CCDC144BQ3MJ40 725 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 GORABQ5T7V8 394 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 CXCL17Q6UXB2 119 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 MAPKAPK5Q8IW41 473 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 ZNF454Q8N9F8 522 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 PRR7Q8TB68 274 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 KLHDC4Q8TBB5 520 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 ACER1Q8TDN7 264 aa6.3□□□□□ -1.4
CKAP4-203ENST00000553039 SH3RF3Q8TEJ3 882 aaPredicted RBP6.3□□□□□ -1.4
CKAP4-203ENST00000553039 CNTNAP3BQ96NU0 1288 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms