RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 TCP1P17987 556 aaKnown RBP12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 SPATA20Q8TB22 786 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 CALML4Q96GE6 196 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 KRT12Q99456 494 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 DISC1Q9NRI5 854 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 KIF11P52732 1056 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 TMC4Q7Z404 712 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 CABP7Q86V35 215 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 NOX5Q96PH1 765 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 NCAPGQ9BPX3 1015 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 STIM2Q9P246 746 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 CAPN6Q9Y6Q1 641 aa12.87□□□□□ -0.35
PPFIA2-227ENST00000552948 MAP3K15Q6ZN16 1313 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 TARSL2A2RTX5 802 aaKnown RBP12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 EIF3HO15372 352 aaKnown RBP eCLIP12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 CSF1RP07333 972 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 PPP2R5BQ15173 497 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 CFAP221Q4G0U5 840 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 ZBTB1Q9Y2K1 713 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 CRYBG1Q9Y4K1 1723 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 MEGF6O75095 1541 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 BACH1O14867 736 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 CCNT1O60563 726 aaKnown RBP12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 TXKP42681 527 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 SEC24CP53992 1094 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 AMPD3Q01432 767 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 EHHADHQ08426 723 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 IFFO1Q0D2I5 559 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 ADSSL1Q8N142 457 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 SRBD1Q8N5C6 995 aaKnown RBP12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 P2RX5Q93086 422 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 OSBPL9Q96SU4 736 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 SNX12Q9UMY4 172 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 MROH5Q6ZUA9 1318 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 RPS6KA5O75582 802 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 VEGFAP15692 232 aaPredicted RBP12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 LONP1P36776 959 aaKnown RBP12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 TECP42680 631 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 PKN1Q16512 942 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 KCTD19Q17RG1 926 aaPredicted RBP12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 SH3RF1Q7Z6J0 888 aa12.86□□□□□ -0.35
PPFIA2-227ENST00000552948 FCER1AP12319 257 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 NAPAP54920 295 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 APBA1Q02410 837 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 PAK2Q13177 524 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 RAPGEF1Q13905 1077 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 CCDC170Q8IYT3 715 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 FNBP4Q8N3X1 1017 aaPredicted RBP12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 UBLCP1Q8WVY7 318 aaPredicted RBP12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 GOPCQ9HD26 462 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 PACSIN2Q9UNF0 486 aaPredicted RBP12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 ABCC12Q96J65 1359 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 KRT18P05783 430 aaKnown RBP12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 GOLGA8HP0CJ92 632 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 TMTC3Q6ZXV5 915 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 PROCA1Q8NCQ7 364 aaPredicted RBP12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 CABS1Q96KC9 395 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 TRIM31Q9BZY9 425 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 TBC1D7Q9P0N9 293 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 SMIM23A6NLE4 172 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 PRPF6O94906 941 aaKnown RBP12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 PRPF4BQ13523 1007 aaKnown RBP12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 ANKRD40Q6AI12 368 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 WDR59Q6PJI9 974 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 CCDC113Q9H0I3 377 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
PPFIA2-227ENST00000552948 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 PLCG1P19174 1290 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 ARID4AP29374 1257 aaPredicted RBP12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 NF2P35240 595 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 LRRC41Q15345 812 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 ZIM3Q96PE6 472 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 ZSCAN5CA6NGD5 496 aaPredicted RBP12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 TRAF5O00463 557 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 CARSP49589 748 aaKnown RBP12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 GFPT1Q06210 699 aaPredicted RBP12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 ACTN3Q08043 901 aaPredicted RBP12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 MTRQ99707 1265 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 TSG101Q99816 390 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 CPVLQ9H3G5 476 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 TLDC2A0PJX2 215 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 NR1D1P20393 614 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 CCNE1P24864 410 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 PDXDC2PQ6P474 469 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 CPLX4Q7Z7G2 160 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 TAX1BP1Q86VP1 789 aa12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 ZNF444Q8N0Y2 327 aaPredicted RBP12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 TSEN2Q8NCE0 465 aaKnown RBP12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 RBM12Q9NTZ6 932 aaKnown RBP12.84□□□□□ -0.35
PPFIA2-227ENST00000552948 LRRC10BA6NIK2 292 aa12.83□□□□□ -0.36
PPFIA2-227ENST00000552948 CEP104O60308 925 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms