RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ANKRD45Q5TZF3 282 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 RCSD1Q6JBY9 416 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 CCDC129Q6ZRS4 1044 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 VTI1AQ96AJ9 217 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 TIFAQ96CG3 184 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 TRERF1Q96PN7 1200 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 SEZ6LQ9BYH1 1024 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 IL17RBQ9NRM6 502 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 Q9Y3F1 56 aa14.04□□□□□ -0.16
CKAP4-202ENST00000552828 TLR3O15455 904 aaKnown RBP14.03□□□□□ -0.16
CKAP4-202ENST00000552828 BEX3Q00994 111 aa14.03□□□□□ -0.16
CKAP4-202ENST00000552828 IQSEC1Q6DN90 963 aa14.03□□□□□ -0.16
CKAP4-202ENST00000552828 PSRC1Q6PGN9 363 aaPredicted RBP14.03□□□□□ -0.16
CKAP4-202ENST00000552828 OTUD7AQ8TE49 926 aaPredicted RBP14.03□□□□□ -0.16
CKAP4-202ENST00000552828 MORC4Q8TE76 937 aa14.03□□□□□ -0.16
CKAP4-202ENST00000552828 FSD1Q9BTV5 496 aa14.03□□□□□ -0.16
CKAP4-202ENST00000552828 PBX4Q9BYU1 374 aa14.03□□□□□ -0.16
CKAP4-202ENST00000552828 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
CKAP4-202ENST00000552828 ANAPC4Q9UJX5 808 aa14.03□□□□□ -0.16
CKAP4-202ENST00000552828 GRIN2DO15399 1336 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 SALL3Q9BXA9 1300 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 IGHDP01880 384 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 FGRP09769 529 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 SMPD1P17405 629 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 FSCN1Q16658 493 aaKnown RBP14.02□□□□□ -0.17
CKAP4-202ENST00000552828 TAPT1Q6NXT6 567 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 CXCL17Q6UXB2 119 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 ZNF365Q70YC5 407 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 KCTD1Q719H9 257 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 TLK2Q86UE8 772 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 SMC5Q8IY18 1101 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 HERVK_113Q902F9 699 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 SYMPKQ92797 1274 aaKnown RBP14.02□□□□□ -0.17
CKAP4-202ENST00000552828 IL23AQ9NPF7 189 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 PRR12Q9ULL5 1215 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 STX8Q9UNK0 236 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 MYH4Q9Y623 1939 aa14.02□□□□□ -0.17
CKAP4-202ENST00000552828 TSPY2A6NKD2 308 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 ORC4O43929 436 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 ALAS1P13196 640 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 MX1P20591 662 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 CYP2C18P33260 490 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 PBX2P40425 430 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 IKQ13123 557 aaPredicted RBP14.01□□□□□ -0.17
CKAP4-202ENST00000552828 ALX1Q15699 326 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 MUM1L1Q5H9M0 696 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 BTNL9Q6UXG8 535 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 NOL8Q76FK4 1167 aaKnown RBP14.01□□□□□ -0.17
CKAP4-202ENST00000552828 USP38Q8NB14 1042 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 PPP1R12CQ9BZL4 782 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 AP5M1Q9H0R1 490 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 INCENPQ9NQS7 918 aa14.01□□□□□ -0.17
CKAP4-202ENST00000552828 LOC102724159A0A0B4J2E5 919 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 GRXCR1A8MXD5 290 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 DYNC1LI2O43237 492 aaPredicted RBP14□□□□□ -0.17
CKAP4-202ENST00000552828 ZEB2O60315 1214 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 NMT2O60551 498 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 ICAM1P05362 532 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 ACRP10323 421 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 CTDSPL2Q05D32 466 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 ITGA7Q13683 1181 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 PWP2Q15269 919 aaKnown RBP14□□□□□ -0.17
CKAP4-202ENST00000552828 AKNAD1Q5T1N1 836 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 B4GALNT3Q6L9W6 998 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 DCAF4Q8WV16 495 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 RANBP17Q9H2T7 1088 aaKnown RBP14□□□□□ -0.17
CKAP4-202ENST00000552828 HIPK3Q9H422 1215 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 VTA1Q9NP79 307 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 PDGFCQ9NRA1 345 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 ISY1Q9ULR0 285 aaKnown RBP14□□□□□ -0.17
CKAP4-202ENST00000552828 CHD7Q9P2D1 2997 aa14□□□□□ -0.17
CKAP4-202ENST00000552828 SNAP25P60880 206 aa13.99□□□□□ -0.17
CKAP4-202ENST00000552828 RAB30Q15771 203 aa13.99□□□□□ -0.17
CKAP4-202ENST00000552828 TJAP1Q5JTD0 557 aa13.99□□□□□ -0.17
CKAP4-202ENST00000552828 TMEM63BQ5T3F8 832 aa13.99□□□□□ -0.17
CKAP4-202ENST00000552828 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
CKAP4-202ENST00000552828 TICAM2Q86XR7 235 aa13.99□□□□□ -0.17
CKAP4-202ENST00000552828 FBXO16Q8IX29 292 aaPredicted RBP13.99□□□□□ -0.17
CKAP4-202ENST00000552828 NOC4LQ9BVI4 516 aaKnown RBP13.99□□□□□ -0.17
CKAP4-202ENST00000552828 CXXC1Q9P0U4 656 aaPredicted RBP13.99□□□□□ -0.17
CKAP4-202ENST00000552828 CCPG1Q9ULG6 757 aa13.99□□□□□ -0.17
CKAP4-202ENST00000552828 DDX49Q9Y6V7 483 aaKnown RBP13.99□□□□□ -0.17
CKAP4-202ENST00000552828 RBM47A0AV96 593 aaKnown RBP13.98□□□□□ -0.17
CKAP4-202ENST00000552828 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
CKAP4-202ENST00000552828 FGBP02675 491 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 PTGS1P23219 599 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 DUSP28Q4G0W2 176 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 RASGRP2Q7LDG7 609 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 CHMP4CQ96CF2 233 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 VWCEQ96DN2 955 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 TRPV6Q9H1D0 765 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 MTIF3Q9H2K0 278 aaKnown RBP13.98□□□□□ -0.17
CKAP4-202ENST00000552828 PRDM6Q9NQX0 595 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 HELLSQ9NRZ9 838 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 TCP11L1Q9NUJ3 509 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 MSRAQ9UJ68 235 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 MCM3APO60318 1980 aa13.98□□□□□ -0.17
CKAP4-202ENST00000552828 UMODL1Q5DID0 1318 aa13.97□□□□□ -0.17
CKAP4-202ENST00000552828 B4GALT4O60513 344 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms