RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 KCTD2Q14681 263 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 RTN1Q16799 776 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 SKOR2Q2VWA4 1001 aaPredicted RBP11.52□□□□□ -0.57
LETMD1-234ENST00000552645 NBPF11Q86T75 865 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 DPP9Q86TI2 863 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 ZSCAN30Q86W11 494 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 TRERF1Q96PN7 1200 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 RNF146Q9NTX7 359 aa11.52□□□□□ -0.57
LETMD1-234ENST00000552645 ATP2A1O14983 1001 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 PGK2P07205 417 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 ELNP15502 786 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 ADORA2AP29274 412 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 COPB2P35606 906 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 GNAQP50148 359 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 METAP2P50579 478 aaKnown RBP eCLIP11.51□□□□□ -0.57
LETMD1-234ENST00000552645 PRMT2P55345 433 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 CCT2P78371 535 aaKnown RBP11.51□□□□□ -0.57
LETMD1-234ENST00000552645 STK3Q13188 491 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 QRICH1Q2TAL8 776 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 HS1BP3Q53T59 392 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 UTP14CQ5TAP6 766 aaKnown RBP11.51□□□□□ -0.57
LETMD1-234ENST00000552645 ANKRD35Q8N283 1001 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 SOCS4Q8WXH5 440 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 DDX11Q96FC9 970 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 PIGSQ96S52 555 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 MAP3K14Q99558 947 aa11.51□□□□□ -0.57
LETMD1-234ENST00000552645 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
LETMD1-234ENST00000552645 hCG_1642624A0A1W2PR95 340 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 SLC15A5A6NIM6 579 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 CYTH3O43739 400 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 STRNO43815 780 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 ADCY3O60266 1144 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 RGS2P41220 211 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 MAP2K5Q13163 448 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 GRB14Q14449 540 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 SLC35G1Q2M3R5 365 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 MUM1L1Q5H9M0 696 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 NSMFQ6X4W1 530 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 FBXO11Q86XK2 927 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 SRBD1Q8N5C6 995 aaKnown RBP11.5□□□□□ -0.57
LETMD1-234ENST00000552645 ACAD9Q9H845 621 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 SEC63Q9UGP8 760 aaKnown RBP11.5□□□□□ -0.57
LETMD1-234ENST00000552645 GJD2Q9UKL4 321 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 HPS5Q9UPZ3 1129 aa11.5□□□□□ -0.57
LETMD1-234ENST00000552645 ZBTB5O15062 677 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 PPFIA3O75145 1194 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 AK2P54819 239 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 MORN1Q5T089 497 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 TMTC3Q6ZXV5 915 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 CHST13Q8NET6 341 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 RRP36Q96EU6 259 aaKnown RBP11.49□□□□□ -0.57
LETMD1-234ENST00000552645 LZTS2Q9BRK4 669 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 RIOX1Q9H6W3 641 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 NCOA5Q9HCD5 579 aaKnown RBP11.49□□□□□ -0.57
LETMD1-234ENST00000552645 RBM28Q9NW13 759 aaKnown RBP11.49□□□□□ -0.57
LETMD1-234ENST00000552645 FBXO40Q9UH90 709 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 MCM3APO60318 1980 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 RBBP6Q7Z6E9 1792 aaKnown RBP11.49□□□□□ -0.57
LETMD1-234ENST00000552645 PTPDC1A2A3K4 754 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 NFIBO00712 420 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 PDIA3P30101 505 aaKnown RBP11.49□□□□□ -0.57
LETMD1-234ENST00000552645 CDC27P30260 824 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 GRK4P32298 578 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 ADD1P35611 737 aaKnown RBP11.49□□□□□ -0.57
LETMD1-234ENST00000552645 DDIT3P35638 169 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 RBM25P49756 843 aaKnown RBP11.49□□□□□ -0.57
LETMD1-234ENST00000552645 ANKRD1Q15327 319 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 CCL14Q16627 93 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 TKFCQ3LXA3 575 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 FBXL16Q8N461 479 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 APBA2Q99767 749 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 SPZ1Q9BXG8 430 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 AMNQ9BXJ7 453 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 AGXT2Q9BYV1 514 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 SLC5A4Q9NY91 659 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 PCDHA1Q9Y5I3 950 aa11.49□□□□□ -0.57
LETMD1-234ENST00000552645 ZNF236Q9UL36 1845 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 PNMA6FA0A0J9YX94 578 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 CCDC196A0A1B0GTZ2 297 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 PPP1R11O60927 126 aaPredicted RBP11.48□□□□□ -0.57
LETMD1-234ENST00000552645 COBLO75128 1261 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 IRF5Q13568 498 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 ABRAQ8N0Z2 381 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 SLAIN1Q8ND83 568 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 NPLOC4Q8TAT6 608 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 A1CFQ9NQ94 594 aaKnown RBP11.48□□□□□ -0.57
LETMD1-234ENST00000552645 PNMA2Q9UL42 364 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 ABCB11O95342 1321 aa11.48□□□□□ -0.57
LETMD1-234ENST00000552645 POTEB2H3BUK9 544 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 CPLX1O14810 134 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 CALML3P27482 149 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 CNTN2Q02246 1040 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 HEATR3Q7Z4Q2 680 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 TRIB2Q92519 343 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 USP6NLQ92738 828 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 MTMR8Q96EF0 704 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 ABHD8Q96I13 439 aa11.47□□□□□ -0.57
LETMD1-234ENST00000552645 KIF2CQ99661 725 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms