RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 UBE2SQ16763 222 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 JAKMIP3Q5VZ66 844 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 PIK3AP1Q6ZUJ8 805 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 RASAL3Q86YV0 1011 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 NOSTRINQ8IVI9 506 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 ZMYND12Q9H0C1 365 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 FOXP1Q9H334 677 aaPredicted RBP10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 SLC38A10Q9HBR0 1119 aa10.01□□□□□ -0.81
AC055716.2-201ENST00000552545 FAM205CA6NFA0 338 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 SPDYE16A6NNV3 312 aaPredicted RBP10□□□□□ -0.81
AC055716.2-201ENST00000552545 ICAM1P05362 532 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 MRPL12P52815 198 aaKnown RBP10□□□□□ -0.81
AC055716.2-201ENST00000552545 TRAF1Q13077 416 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 MOGSQ13724 837 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 NOM1Q5C9Z4 860 aaKnown RBP10□□□□□ -0.81
AC055716.2-201ENST00000552545 GPAT2Q6NUI2 795 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 BRAPQ7Z569 592 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 CUL5Q93034 780 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 MS4A4AQ96JQ5 239 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 GDPD2Q9HCC8 539 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 TMEM260Q9NX78 707 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 CNPY2Q9Y2B0 182 aa10□□□□□ -0.81
AC055716.2-201ENST00000552545 CCDC194A0A1B0GVG4 234 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 PDHXO00330 501 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 FIBPO43427 364 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 CFBP00751 764 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 CYP2C8P10632 490 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 U2AF2P26368 475 aaKnown RBP eCLIP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 HOXA7P31268 230 aaPredicted RBP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 SNRNP48Q6IEG0 339 aaKnown RBP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 USP17L6PQ6QN14 398 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 REXO1Q8N1G1 1221 aaKnown RBP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 BICD2Q8TD16 824 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 BRI3BPQ8WY22 251 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 PGBD1Q96JS3 809 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 PCDHA6Q9UN73 950 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 MRPL11Q9Y3B7 192 aaKnown RBP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 PCDHA8Q9Y5H6 950 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 ZNF536O15090 1300 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 BTBD19C9JJ37 291 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 FDX1P10109 184 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 HOXA13P31271 388 aaPredicted RBP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 HERVK_113P62684 666 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 TMEM132BQ14DG7 1078 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 NPY5RQ15761 445 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 EARS2Q5JPH6 523 aaKnown RBP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 GALNT17Q6IS24 598 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 PPP1R18Q6NYC8 613 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 SMCR8Q8TEV9 937 aaPredicted RBP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 ZNF396Q96N95 335 aaPredicted RBP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 FTOQ9C0B1 505 aaKnown RBP eCLIP9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 RIC8AQ9NPQ8 531 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 ABCB11O95342 1321 aa9.99□□□□□ -0.81
AC055716.2-201ENST00000552545 KRT85P78386 507 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 NBR1Q14596 966 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 MYSM1Q5VVJ2 828 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 CYP4F22Q6NT55 531 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 FCHSD1Q86WN1 690 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 FAM43AQ8N2R8 423 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 RGS22Q8NE09 1264 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 TBC1D5Q92609 795 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 TRERF1Q96PN7 1200 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 PNMA3Q9UL41 463 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 GOLGA6L22H0YM25 854 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 STAT3P40763 770 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 MUM1L1Q5H9M0 696 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 DAGLBQ8NCG7 672 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 CCDC102AQ96A19 550 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 PTPN18Q99952 460 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 BTBD7Q9P203 1132 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 NOL7Q9UMY1 257 aaKnown RBP9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 ADAMTS5Q9UNA0 930 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 RIPK3Q9Y572 518 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 MYPNQ86TC9 1320 aa9.98□□□□□ -0.81
AC055716.2-201ENST00000552545 ESYT2A0FGR8 921 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 SLC10A3P09131 477 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 INF2Q27J81 1249 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 WDR78Q5VTH9 848 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 NSMFQ6X4W1 530 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 USP28Q96RU2 1077 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 RNF146Q9NTX7 359 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 CFAP45Q9UL16 551 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 CLIC4Q9Y696 253 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 MANSC4A6NHS7 340 aaPredicted RBP9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 GCOM1H8Y6P7 765 aaPredicted RBP9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 NFIBO00712 420 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 PRPF40AO75400 957 aaKnown RBP9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 ECM2O94769 699 aaPredicted RBP9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 POLR2MP0CAP2 368 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 NONOQ15233 471 aaKnown RBP eCLIP9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 DEFB115Q30KQ5 88 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 KRT25Q7Z3Z0 450 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 ANKRD23Q86SG2 305 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 NCAPG2Q86XI2 1143 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 FAM177A1Q8N128 213 aaPredicted RBP9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 REPS2Q8NFH8 660 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 TNFRSF25Q93038 417 aa9.97□□□□□ -0.81
AC055716.2-201ENST00000552545 SPATA32Q96LK8 384 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms