RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 SPAG1Q07617 926 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 UHMK1Q8TAS1 419 aaKnown RBP12□□□□□ -0.49
TGFBR1-209ENST00000552516 KIAA1524Q8TCG1 905 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 VTI1AQ96AJ9 217 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 ABCC12Q96J65 1359 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 UTYO14607 1347 aa12□□□□□ -0.49
TGFBR1-209ENST00000552516 DLATP10515 647 aaKnown RBP11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 PANK4Q9NVE7 773 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 CDC37Q16543 378 aaPredicted RBP11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 DDAH1O94760 285 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 FAM102BQ5T8I3 360 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 VPS36Q86VN1 386 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 PLA2G4DQ86XP0 818 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 ALS2CR12Q96Q35 445 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 ZNF341Q9BYN7 854 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 ACBD3Q9H3P7 528 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 DAGLAQ9Y4D2 1042 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 PRPF6O94906 941 aaKnown RBP11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 MKRN4PQ13434 485 aaPredicted RBP11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 SHROOM1Q2M3G4 852 aaPredicted RBP11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 KMT5BQ4FZB7 885 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 LEKR1Q6ZMV7 388 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 TOGARAM2Q6ZUX3 1019 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 LSM14BQ9BX40 385 aaKnown RBP11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 TMEM60Q9H2L4 133 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 VPS18Q9P253 973 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 GOLGA8IPA6NC78 632 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 GOLGA8JA6NMD2 632 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 SSTR3P32745 418 aaPredicted RBP11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 ARFGAP3Q9NP61 516 aa11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 RGPD8O14715 1765 aaPredicted RBP11.99□□□□□ -0.49
TGFBR1-209ENST00000552516 HS1BP3Q53T59 392 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 JAKMIP2Q96AA8 810 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 CNOT6LQ96LI5 555 aaKnown RBP11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 USP42Q9H9J4 1324 aaKnown RBP11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 POTECB2RU33 542 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 KIF2AO00139 706 aaPredicted RBP11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 SRGAP2O75044 1071 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 Q3C1V9 767 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 CNNM4Q6P4Q7 775 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 GADL1Q6ZQY3 521 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 CNGA4Q8IV77 575 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 MYRIPQ8NFW9 859 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 PPP1R13BQ96KQ4 1090 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 A0A1W2PQ27 194 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 A0A1W2PQ64 194 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 A0A1W2PQD8 194 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 POTEFA5A3E0 1075 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 PRPF3O43395 683 aaKnown RBP11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 IFFO1Q0D2I5 559 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 POTEGQ6S5H5 508 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 POTEEQ6S8J3 1075 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 BICDL2A1A5D9 508 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 GYS2P54840 703 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 DHX40Q8IX18 779 aaKnown RBP11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 PROCA1Q8NCQ7 364 aaPredicted RBP11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 TUBGCP2Q9BSJ2 902 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 KRT86O43790 486 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 CSPG5O95196 566 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 MAGEA1P43355 309 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 OSTNP61366 133 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 TTC19Q6DKK2 380 aaPredicted RBP11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 MTERF4Q7Z6M4 381 aaKnown RBP11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 BHMT2Q9H2M3 363 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 LRRC4BQ9NT99 713 aa11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
TGFBR1-209ENST00000552516 OVOS2A0A0G2JMS6 1433 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 SEMA3EO15041 775 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 SLFN14P0C7P3 912 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 PRCPP42785 496 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 R3HDM1Q15032 1099 aaKnown RBP11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 FER1L4A9Z1Z3 1794 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 GOLGA6L10A6NI86 522 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 ZEB2O60315 1214 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 MARK3P27448 753 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 VPS41P49754 854 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 USTQ9Y2C2 406 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 COPB1P53618 953 aaKnown RBP11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 EHMT1Q9H9B1 1298 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 RAVER2Q9HCJ3 691 aaKnown RBP11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 CETN3O15182 167 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 PTPREP23469 700 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 C12orf60Q5U649 245 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 PPP4R3AQ6IN85 833 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 SEPT14Q6ZU15 432 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 AMIGO3Q86WK7 504 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 DNAAF5Q86Y56 855 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 ADGRF4Q8IZF3 695 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 METTL13Q8N6R0 699 aa11.97□□□□□ -0.49
TGFBR1-209ENST00000552516 PPP6R2O75170 966 aa11.96□□□□□ -0.49
TGFBR1-209ENST00000552516 ADAM9Q13443 819 aa11.96□□□□□ -0.49
TGFBR1-209ENST00000552516 NCAPG2Q86XI2 1143 aa11.96□□□□□ -0.49
TGFBR1-209ENST00000552516 LARP4BQ92615 738 aaKnown RBP11.96□□□□□ -0.49
TGFBR1-209ENST00000552516 FBXO28Q9NVF7 368 aa11.96□□□□□ -0.49
TGFBR1-209ENST00000552516 RGL1Q9NZL6 768 aa11.96□□□□□ -0.49
TGFBR1-209ENST00000552516 GYS1P13807 737 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms