RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 CYP7A1P22680 504 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 LTBRP36941 435 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 USP5P45974 858 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 FSCN1Q16658 493 aaKnown RBP12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 PUS10Q3MIT2 529 aaKnown RBP12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 CCDC144CPQ8IYA2 1237 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 PBXIP1Q96AQ6 731 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 PPP1R9AQ9ULJ8 1098 aa12.47□□□□□ -0.41
SLC48A1-209ENST00000552003 NAV1Q8NEY1 1877 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 TNKSO95271 1327 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 MED19A0JLT2 244 aaPredicted RBP12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 WDR46O15213 610 aaKnown RBP12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 CYP2D6P10635 497 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 ACTN1P12814 892 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 AKR1B1P15121 316 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 SMPD1P17405 629 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 ZAP70P43403 619 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 WDR5P61964 334 aaKnown RBP12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 TNFAIP2Q03169 654 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 GORABQ5T7V8 394 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 TRIM67Q6ZTA4 783 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 TTC6Q86TZ1 520 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 TLK2Q86UE8 772 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 MAGEB6Q8N7X4 407 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 SSH1Q8WYL5 1049 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 DDX11Q96FC9 970 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 C17orf80Q9BSJ5 609 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 PDGFCQ9NRA1 345 aa12.46□□□□□ -0.41
SLC48A1-209ENST00000552003 CHD8Q9HCK8 2581 aa12.46□□□□□ -0.42
SLC48A1-209ENST00000552003 PROB1E7EW31 1015 aa12.45□□□□□ -0.42
SLC48A1-209ENST00000552003 DYNC1LI2O43237 492 aaPredicted RBP12.45□□□□□ -0.42
SLC48A1-209ENST00000552003 UQCRFS1P1P0C7P4 283 aa12.45□□□□□ -0.42
SLC48A1-209ENST00000552003 CNTN2Q02246 1040 aa12.45□□□□□ -0.42
SLC48A1-209ENST00000552003 DLX2Q07687 328 aaPredicted RBP12.45□□□□□ -0.42
SLC48A1-209ENST00000552003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.45□□□□□ -0.42
SLC48A1-209ENST00000552003 TGS1Q96RS0 853 aaKnown RBP12.45□□□□□ -0.42
SLC48A1-209ENST00000552003 SCN10AQ9Y5Y9 1956 aa12.45□□□□□ -0.42
SLC48A1-209ENST00000552003 H0Y858 1186 aa12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 ID4P47928 161 aa12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 TCEAL5Q5H9L2 206 aa12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 FAM83BQ5T0W9 1011 aa12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 SNRNP48Q6IEG0 339 aaKnown RBP12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 TMEM179Q6ZVK1 233 aa12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 ATOH1Q92858 354 aaPredicted RBP12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 PABPC5Q96DU9 382 aaKnown RBP12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 DYNLL2Q96FJ2 89 aa12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 DBNDD2Q9BQY9 259 aa12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 RIOK1Q9BRS2 568 aaKnown RBP12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 TLR9Q9NR96 1032 aa12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 MYH8P13535 1937 aa12.44□□□□□ -0.42
SLC48A1-209ENST00000552003 SPTBN2O15020 2390 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 PRR23AA6NEV1 266 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 GJB5O95377 273 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 RFC2P35250 354 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 ICA1Q05084 483 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 SMAD2Q15796 467 aaKnown RBP12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 CLUL1Q15846 466 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 TAPT1Q6NXT6 567 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 FBXL6Q8N531 539 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 MRPL38Q96DV4 380 aaKnown RBP12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 NUP88Q99567 741 aaPredicted RBP12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 MEIS3Q99687 375 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 PRRX2Q99811 253 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 TEX13BQ9BXU2 312 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 SEZ6LQ9BYH1 1024 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 UPF3BQ9BZI7 483 aaKnown RBP12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 CEP250Q9BV73 2442 aa12.43□□□□□ -0.42
SLC48A1-209ENST00000552003 BAIAP3O94812 1187 aa12.42□□□□□ -0.42
SLC48A1-209ENST00000552003 COPB2P35606 906 aa12.42□□□□□ -0.42
SLC48A1-209ENST00000552003 SLC4A3P48751 1232 aa12.42□□□□□ -0.42
SLC48A1-209ENST00000552003 NOL8Q76FK4 1167 aaKnown RBP12.42□□□□□ -0.42
SLC48A1-209ENST00000552003 CTAGE1Q96RT6 745 aa12.42□□□□□ -0.42
SLC48A1-209ENST00000552003 RAD9AQ99638 391 aa12.42□□□□□ -0.42
SLC48A1-209ENST00000552003 TRPC6Q9Y210 931 aa12.42□□□□□ -0.42
SLC48A1-209ENST00000552003 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
SLC48A1-209ENST00000552003 LCTP09848 1927 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 SRGAP3O43295 1099 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 MBTPS2O43462 519 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 POLR3DP05423 398 aaPredicted RBP12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 SUPT20HL2P0C7V6 817 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 EEF2P13639 858 aaKnown RBP12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 AVPR2P30518 371 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 ZXDAP98168 799 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 FAM117BQ6P1L5 589 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 EP400NLQ6ZTU2 488 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 FAM133AQ8N9E0 248 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 BANK1Q8NDB2 785 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 ZBED2Q9BTP6 218 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 FSD1Q9BTV5 496 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 ARHGEF10LQ9HCE6 1279 aa12.41□□□□□ -0.42
SLC48A1-209ENST00000552003 ATRXP46100 2492 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 KCNJ6P48051 423 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 PURAQ00577 322 aaKnown RBP12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 MTX1Q13505 466 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 CTC1Q2NKJ3 1217 aa12.4□□□□□ -0.42
SLC48A1-209ENST00000552003 NBPF20Q3BBV1 942 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms