RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, humanhuman

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1-206ENST00000550558 CNTNAP5Q8WYK1 1306 aa18.82■□□□□ 0.6
ASIC1-206ENST00000550558 CCDC66A2RUB6 948 aa18.82■□□□□ 0.6
ASIC1-206ENST00000550558 MMP10P09238 476 aa18.82■□□□□ 0.6
ASIC1-206ENST00000550558 PCP11498 1178 aaKnown RBP18.82■□□□□ 0.6
ASIC1-206ENST00000550558 CLCN6P51797 869 aa18.82■□□□□ 0.6
ASIC1-206ENST00000550558 KRT83P78385 493 aa18.82■□□□□ 0.6
ASIC1-206ENST00000550558 BMP6P22004 513 aa18.81■□□□□ 0.6
ASIC1-206ENST00000550558 FXR1P51114 621 aaKnown RBP eCLIP18.81■□□□□ 0.6
ASIC1-206ENST00000550558 GYS2P54840 703 aa18.81■□□□□ 0.6
ASIC1-206ENST00000550558 DHX37Q8IY37 1157 aaKnown RBP18.81■□□□□ 0.6
ASIC1-206ENST00000550558 CEP112Q8N8E3 955 aa18.81■□□□□ 0.6
ASIC1-206ENST00000550558 CERKLQ49MI3 558 aaPredicted RBP18.81■□□□□ 0.6
ASIC1-206ENST00000550558 ZNF658Q5TYW1 1059 aaPredicted RBP18.81■□□□□ 0.6
ASIC1-206ENST00000550558 KIFC2Q96AC6 838 aa18.81■□□□□ 0.6
ASIC1-206ENST00000550558 DDX25Q9UHL0 483 aaKnown RBP18.81■□□□□ 0.6
ASIC1-206ENST00000550558 H7C1D1 291 aa18.81■□□□□ 0.6
ASIC1-206ENST00000550558 BUB1O43683 1085 aa18.81■□□□□ 0.6
ASIC1-206ENST00000550558 HOXA13P31271 388 aaPredicted RBP18.81■□□□□ 0.6
ASIC1-206ENST00000550558 CXCR5P32302 372 aa18.81■□□□□ 0.6
ASIC1-206ENST00000550558 ATP2C1P98194 919 aaPredicted RBP18.81■□□□□ 0.6
ASIC1-206ENST00000550558 PABPC4Q13310 644 aaKnown RBP eCLIP18.81■□□□□ 0.6
ASIC1-206ENST00000550558 SLFN13Q68D06 897 aa18.8■□□□□ 0.6
ASIC1-206ENST00000550558 GPBP1Q86WP2 473 aa18.8■□□□□ 0.6
ASIC1-206ENST00000550558 ALS2CR12Q96Q35 445 aa18.8■□□□□ 0.6
ASIC1-206ENST00000550558 CHP1Q99653 195 aa18.8■□□□□ 0.6
ASIC1-206ENST00000550558 BPIFA3Q9BQP9 254 aa18.8■□□□□ 0.6
ASIC1-206ENST00000550558 PCDHB13Q9Y5F0 798 aa18.8■□□□□ 0.6
ASIC1-206ENST00000550558 FAM205AQ6ZU69 1335 aa18.8■□□□□ 0.6
ASIC1-206ENST00000550558 TACC1O75410 805 aa18.8■□□□□ 0.6
ASIC1-206ENST00000550558 TRAPPC10P48553 1259 aa18.8■□□□□ 0.6
ASIC1-206ENST00000550558 ZNF579Q8NAF0 562 aaKnown RBP18.8■□□□□ 0.6
ASIC1-206ENST00000550558 ZCCHC17Q9NP64 241 aaKnown RBP18.8■□□□□ 0.6
ASIC1-206ENST00000550558 CHD2O14647 1828 aaKnown RBP18.8■□□□□ 0.6
ASIC1-206ENST00000550558 SRGAP2O75044 1071 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 TCP11X2Q5H9J9 407 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 IFT81Q8WYA0 676 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 AFF2P51816 1311 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 USP17L10C9JJH3 530 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 MRPL44Q9H9J2 332 aaKnown RBP18.79■□□□□ 0.6
ASIC1-206ENST00000550558 ORC4O43929 436 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 SORBS3O60504 671 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 ECM2O94769 699 aaPredicted RBP18.79■□□□□ 0.6
ASIC1-206ENST00000550558 TFRCP02786 760 aaKnown RBP18.79■□□□□ 0.6
ASIC1-206ENST00000550558 MAGEA1P43355 309 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 ICA1Q05084 483 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 ERMNQ8TAM6 284 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 TRIM10Q9UDY6 481 aa18.79■□□□□ 0.6
ASIC1-206ENST00000550558 PPIP5K2O43314 1243 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 MFAP3LO75121 409 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 TPH2Q8IWU9 490 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 TC2NQ8N9U0 490 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 LZTS2Q9BRK4 669 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 RAD17O75943 681 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 RASA1P20936 1047 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 CCDC65Q8IXS2 484 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 RGS22Q8NE09 1264 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 LARP4BQ92615 738 aaKnown RBP18.78■□□□□ 0.6
ASIC1-206ENST00000550558 BCCIPQ9P287 314 aaKnown RBP eCLIP18.78■□□□□ 0.6
ASIC1-206ENST00000550558 H0YIN7 160 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 BBOX1O75936 387 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 PCDHA6Q9UN73 950 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 PCDHA8Q9Y5H6 950 aa18.78■□□□□ 0.6
ASIC1-206ENST00000550558 PPP1R12BO60237 982 aaPredicted RBP18.77■□□□□ 0.6
ASIC1-206ENST00000550558 SF3B2Q13435 895 aaKnown RBP18.77■□□□□ 0.6
ASIC1-206ENST00000550558 MIGA2Q7L4E1 593 aa18.77■□□□□ 0.6
ASIC1-206ENST00000550558 IFIH1Q9BYX4 1025 aaKnown RBP18.77■□□□□ 0.6
ASIC1-206ENST00000550558 FAM107BQ9H098 131 aa18.77■□□□□ 0.6
ASIC1-206ENST00000550558 GBP3Q9H0R5 595 aa18.77■□□□□ 0.6
ASIC1-206ENST00000550558 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.77■□□□□ 0.6
ASIC1-206ENST00000550558 TTC26A0AVF1 554 aa18.77■□□□□ 0.6
ASIC1-206ENST00000550558 SFI1A8K8P3 1242 aa18.77■□□□□ 0.6
ASIC1-206ENST00000550558 OAS2P29728 719 aaKnown RBP18.77■□□□□ 0.6
ASIC1-206ENST00000550558 RAD9BQ6WBX8 426 aa18.77■□□□□ 0.6
ASIC1-206ENST00000550558 P2RX5Q93086 422 aa18.77■□□□□ 0.6
ASIC1-206ENST00000550558 FAM13AO94988 1023 aa18.77■□□□□ 0.59
ASIC1-206ENST00000550558 TTLL1O95922 423 aa18.77■□□□□ 0.59
ASIC1-206ENST00000550558 PRKG1Q13976 671 aa18.77■□□□□ 0.59
ASIC1-206ENST00000550558 HDAC6Q9UBN7 1215 aa18.77■□□□□ 0.59
ASIC1-206ENST00000550558 DNM2P50570 870 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 SMAP1Q8IYB5 467 aaPredicted RBP18.76■□□□□ 0.59
ASIC1-206ENST00000550558 TDRD3Q9H7E2 651 aaKnown RBP18.76■□□□□ 0.59
ASIC1-206ENST00000550558 SSR1P43307 286 aaKnown RBP18.76■□□□□ 0.59
ASIC1-206ENST00000550558 TBC1D16Q8TBP0 767 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 PARD6BQ9BYG5 372 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 BARHL2Q9NY43 387 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 GCNT3O95395 438 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 TUBB4AP04350 444 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 DPYDQ12882 1025 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 LARGE2Q8N3Y3 721 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 IL17RBQ9NRM6 502 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 RWDD2AQ9UIY3 292 aa18.76■□□□□ 0.59
ASIC1-206ENST00000550558 STK4Q13043 487 aa18.75■□□□□ 0.59
ASIC1-206ENST00000550558 GRM4Q14833 912 aa18.75■□□□□ 0.59
ASIC1-206ENST00000550558 TMEM132AQ24JP5 1023 aa18.75■□□□□ 0.59
ASIC1-206ENST00000550558 WDR78Q5VTH9 848 aa18.75■□□□□ 0.59
ASIC1-206ENST00000550558 KRT26Q7Z3Y9 468 aa18.75■□□□□ 0.59
ASIC1-206ENST00000550558 GJD4Q96KN9 370 aaPredicted RBP18.75■□□□□ 0.59
ASIC1-206ENST00000550558 JCADQ9P266 1359 aa18.75■□□□□ 0.59
ASIC1-206ENST00000550558 KIF20AO95235 890 aa18.75■□□□□ 0.59
ASIC1-206ENST00000550558 STAT3P40763 770 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms