RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CYP39A1Q9NYL5 469 aa25.66■■□□□ 1.7
SMARCC2-210ENST00000550519 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.65■■□□□ 1.7
SMARCC2-210ENST00000550519 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.65■■□□□ 1.7
SMARCC2-210ENST00000550519 BEX3Q00994 111 aa25.65■■□□□ 1.7
SMARCC2-210ENST00000550519 MAFAQ8NHW3 353 aaPredicted RBP25.65■■□□□ 1.7
SMARCC2-210ENST00000550519 DCAF4Q8WV16 495 aa25.65■■□□□ 1.7
SMARCC2-210ENST00000550519 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.65■■□□□ 1.79e-7■■■■□ 24.4
SMARCC2-210ENST00000550519 COL25A1Q9BXS0 654 aaPredicted RBP25.65■■□□□ 1.7
SMARCC2-210ENST00000550519 NOL8Q76FK4 1167 aaKnown RBP25.64■■□□□ 1.7
SMARCC2-210ENST00000550519 C16orf59Q7L2K0 433 aa25.64■■□□□ 1.7
SMARCC2-210ENST00000550519 TICAM2Q86XR7 235 aa25.64■■□□□ 1.7
SMARCC2-210ENST00000550519 SLC43A3Q8NBI5 491 aa25.64■■□□□ 1.7
SMARCC2-210ENST00000550519 DDX49Q9Y6V7 483 aaKnown RBP25.64■■□□□ 1.7
SMARCC2-210ENST00000550519 CD4P01730 458 aa25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 FGAP02671 866 aa25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 ICAM1P05362 532 aa25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 PPIGQ13427 754 aaKnown RBP eCLIP25.63■■□□□ 1.691e-6■■□□□ 12.5
SMARCC2-210ENST00000550519 HDAC1Q13547 482 aaPredicted RBP25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 BTNL9Q6UXG8 535 aa25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 TLK2Q86UE8 772 aa25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 FAM227BQ96M60 508 aa25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 CRBNQ96SW2 442 aa25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 RANBP17Q9H2T7 1088 aaKnown RBP25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 CCPG1Q9ULG6 757 aa25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 MTMR7Q9Y216 660 aa25.63■■□□□ 1.69
SMARCC2-210ENST00000550519 TLR3O15455 904 aaKnown RBP25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 CABYRO75952 493 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 SMPD1P17405 629 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 DNAJB2P25686 324 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 CCDC96Q2M329 555 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 MCMDC2Q4G0Z9 681 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 TMEM240Q5SV17 173 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 IQSEC1Q6DN90 963 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 TAPT1Q6NXT6 567 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 CXCL17Q6UXB2 119 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 MORC4Q8TE76 937 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 PDGFCQ9NRA1 345 aa25.62■■□□□ 1.69
SMARCC2-210ENST00000550519 CDH23Q9H251 3354 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 EYSQ5T1H1 3165 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 A0A0D9SFI3 127 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 CSF2RAP15509 400 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 FSCN1Q16658 493 aaKnown RBP25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 RASIP1Q5U651 963 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 TTBK2Q6IQ55 1244 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 NSMFQ6X4W1 530 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 TMEM199Q8N511 208 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 TMEM47Q9BQJ4 181 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 AP5M1Q9H0R1 490 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 TCP11L1Q9NUJ3 509 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 Q9Y3F1 56 aa25.61■■□□□ 1.69
SMARCC2-210ENST00000550519 DYNC1LI2O43237 492 aaPredicted RBP25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 TOP1P11387 765 aaKnown RBP25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 FOSL2P15408 326 aa25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 PTGS1P23219 599 aa25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 SLC16A2P36021 539 aa25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 EEPD1Q7L9B9 569 aa25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 FBXO16Q8IX29 292 aaPredicted RBP25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 PURBQ96QR8 312 aaKnown RBP25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 PPP1R12CQ9BZL4 782 aa25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 TOMM22Q9NS69 142 aa25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 ZMYM6O95789 1325 aa25.6■■□□□ 1.69
SMARCC2-210ENST00000550519 HSPD1P10809 573 aaKnown RBP25.59■■□□□ 1.69
SMARCC2-210ENST00000550519 GRIN2CQ14957 1233 aa25.59■■□□□ 1.69
SMARCC2-210ENST00000550519 RRP12Q5JTH9 1297 aaKnown RBP25.59■■□□□ 1.69
SMARCC2-210ENST00000550519 TMEM63BQ5T3F8 832 aa25.59■■□□□ 1.69
SMARCC2-210ENST00000550519 SYDE2Q5VT97 1194 aa25.59■■□□□ 1.69
SMARCC2-210ENST00000550519 VTA1Q9NP79 307 aa25.59■■□□□ 1.69
SMARCC2-210ENST00000550519 GRIN2DO15399 1336 aa25.59■■□□□ 1.69
SMARCC2-210ENST00000550519 ITGA7Q13683 1181 aa25.58■■□□□ 1.69
SMARCC2-210ENST00000550519 BAATQ14032 418 aaPredicted RBP25.58■■□□□ 1.69
SMARCC2-210ENST00000550519 ZNF589Q86UQ0 364 aaPredicted RBP25.58■■□□□ 1.69
SMARCC2-210ENST00000550519 SEZ6LQ9BYH1 1024 aa25.58■■□□□ 1.69
SMARCC2-210ENST00000550519 PRUNE2Q8WUY3 3088 aa25.58■■□□□ 1.69
SMARCC2-210ENST00000550519 ZEB2O60315 1214 aa25.57■■□□□ 1.68
SMARCC2-210ENST00000550519 ACRP10323 421 aa25.57■■□□□ 1.68
SMARCC2-210ENST00000550519 CYP2C18P33260 490 aa25.57■■□□□ 1.68
SMARCC2-210ENST00000550519 PSRC1Q6PGN9 363 aaPredicted RBP25.57■■□□□ 1.68
SMARCC2-210ENST00000550519 ZNF365Q70YC5 407 aa25.57■■□□□ 1.68
SMARCC2-210ENST00000550519 TIFAQ96CG3 184 aa25.57■■□□□ 1.68
SMARCC2-210ENST00000550519 ZNF576Q9H609 170 aa25.57■■□□□ 1.68
SMARCC2-210ENST00000550519 LRRC37A2A6NM11 1700 aa25.57■■□□□ 1.68
SMARCC2-210ENST00000550519 LOC102724159A0A0B4J2E5 919 aa25.56■■□□□ 1.68
SMARCC2-210ENST00000550519 NFIBO00712 420 aa25.56■■□□□ 1.68
SMARCC2-210ENST00000550519 NMIQ13287 307 aaPredicted RBP25.56■■□□□ 1.68
SMARCC2-210ENST00000550519 PWP2Q15269 919 aaKnown RBP25.56■■□□□ 1.68
SMARCC2-210ENST00000550519 KIAA1211Q6ZU35 1233 aa25.56■■□□□ 1.68
SMARCC2-210ENST00000550519 GPCPD1Q9NPB8 672 aa25.56■■□□□ 1.68
SMARCC2-210ENST00000550519 ADD3Q9UEY8 706 aaKnown RBP25.56■■□□□ 1.68
SMARCC2-210ENST00000550519 FRMPD2Q68DX3 1309 aaPredicted RBP25.56■■□□□ 1.68
SMARCC2-210ENST00000550519 PDHBP11177 359 aa25.55■■□□□ 1.68
SMARCC2-210ENST00000550519 ALDH5A1P51649 535 aaPredicted RBP25.55■■□□□ 1.68
SMARCC2-210ENST00000550519 DUSP28Q4G0W2 176 aa25.55■■□□□ 1.68
SMARCC2-210ENST00000550519 TTC14Q96N46 770 aa25.55■■□□□ 1.68
SMARCC2-210ENST00000550519 PBX4Q9BYU1 374 aa25.55■■□□□ 1.68
SMARCC2-210ENST00000550519 HIPK3Q9H422 1215 aa25.55■■□□□ 1.68
SMARCC2-210ENST00000550519 IL23AQ9NPF7 189 aa25.55■■□□□ 1.68
SMARCC2-210ENST00000550519 PCP11498 1178 aaKnown RBP25.54■■□□□ 1.68
SMARCC2-210ENST00000550519 HAND2P61296 217 aa25.54■■□□□ 1.68
SMARCC2-210ENST00000550519 AKNAD1Q5T1N1 836 aa25.54■■□□□ 1.68
SMARCC2-210ENST00000550519 CLEC4DQ8WXI8 215 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms