RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ZNF333Q96JL9 665 aa26.17■■□□□ 1.78
BRF1-216ENST00000550208 CCDC85CA6NKD9 419 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 GOLGA8AA7E2F4 631 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 GOLGA8BA8MQT2 603 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 ZBTB5O15062 677 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 PPP1R11O60927 126 aaPredicted RBP26.16■■□□□ 1.78
BRF1-216ENST00000550208 RTN1Q16799 776 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 ZNF792Q3KQV3 632 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 CCDC82Q8N4S0 544 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 CLEC4DQ8WXI8 215 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 SPZ1Q9BXG8 430 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 C22orf23Q9BZE7 217 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 A1CFQ9NQ94 594 aaKnown RBP26.16■■□□□ 1.78
BRF1-216ENST00000550208 FAM217BQ9NTX9 383 aaPredicted RBP26.16■■□□□ 1.78
BRF1-216ENST00000550208 SLC5A4Q9NY91 659 aa26.16■■□□□ 1.78
BRF1-216ENST00000550208 DNAJC25-GNG10A0A024R161 153 aa26.15■■□□□ 1.78
BRF1-216ENST00000550208 INHAP05111 366 aa26.15■■□□□ 1.78
BRF1-216ENST00000550208 EVCP57679 992 aa26.15■■□□□ 1.78
BRF1-216ENST00000550208 TMTC3Q6ZXV5 915 aa26.15■■□□□ 1.78
BRF1-216ENST00000550208 TRMT44Q8IYL2 757 aaKnown RBP26.15■■□□□ 1.78
BRF1-216ENST00000550208 NFIBO00712 420 aa26.14■■□□□ 1.78
BRF1-216ENST00000550208 HMGCRP04035 888 aa26.14■■□□□ 1.78
BRF1-216ENST00000550208 CDC27P30260 824 aa26.14■■□□□ 1.78
BRF1-216ENST00000550208 MTFR1Q15390 333 aa26.14■■□□□ 1.78
BRF1-216ENST00000550208 NSMFQ6X4W1 530 aa26.14■■□□□ 1.78
BRF1-216ENST00000550208 AMNQ9BXJ7 453 aa26.14■■□□□ 1.78
BRF1-216ENST00000550208 RBM28Q9NW13 759 aaKnown RBP26.14■■□□□ 1.78
BRF1-216ENST00000550208 PNMA6FA0A0J9YX94 578 aa26.13■■□□□ 1.77
BRF1-216ENST00000550208 PDIA3P30101 505 aaKnown RBP26.13■■□□□ 1.77
BRF1-216ENST00000550208 ADD1P35611 737 aaKnown RBP26.13■■□□□ 1.77
BRF1-216ENST00000550208 RCAN1P53805 252 aa26.13■■□□□ 1.77
BRF1-216ENST00000550208 UBXN2AP68543 259 aa26.13■■□□□ 1.77
BRF1-216ENST00000550208 MAML3Q96JK9 1138 aa26.13■■□□□ 1.77
BRF1-216ENST00000550208 ALDH8A1Q9H2A2 487 aaPredicted RBP26.13■■□□□ 1.77
BRF1-216ENST00000550208 DIS3Q9Y2L1 958 aaKnown RBP26.13■■□□□ 1.77
BRF1-216ENST00000550208 ABCB11O95342 1321 aa26.13■■□□□ 1.77
BRF1-216ENST00000550208 ZNF236Q9UL36 1845 aa26.12■■□□□ 1.77
BRF1-216ENST00000550208 IGHA2P01877 340 aa26.12■■□□□ 1.77
BRF1-216ENST00000550208 METAP2P50579 478 aaKnown RBP eCLIP26.12■■□□□ 1.77
BRF1-216ENST00000550208 CNTN2Q02246 1040 aa26.12■■□□□ 1.77
BRF1-216ENST00000550208 BAATQ14032 418 aaPredicted RBP26.12■■□□□ 1.77
BRF1-216ENST00000550208 TBC1D5Q92609 795 aa26.12■■□□□ 1.77
BRF1-216ENST00000550208 RRP36Q96EU6 259 aaKnown RBP26.12■■□□□ 1.77
BRF1-216ENST00000550208 CYP39A1Q9NYL5 469 aa26.12■■□□□ 1.77
BRF1-216ENST00000550208 PCDHA1Q9Y5I3 950 aa26.12■■□□□ 1.77
BRF1-216ENST00000550208 hCG_1642624A0A1W2PR95 340 aa26.11■■□□□ 1.77
BRF1-216ENST00000550208 POTEB2H3BUK9 544 aa26.11■■□□□ 1.77
BRF1-216ENST00000550208 CYP2C19P33261 490 aa26.11■■□□□ 1.77
BRF1-216ENST00000550208 NEK4P51957 841 aa26.11■■□□□ 1.77
BRF1-216ENST00000550208 OLFML2BQ68BL8 750 aa26.11■■□□□ 1.77
BRF1-216ENST00000550208 PURBQ96QR8 312 aaKnown RBP26.11■■□□□ 1.77
BRF1-216ENST00000550208 KIF2CQ99661 725 aa26.11■■□□□ 1.77
BRF1-216ENST00000550208 MRPL11Q9Y3B7 192 aaKnown RBP26.11■■□□□ 1.77
BRF1-216ENST00000550208 MYH6P13533 1939 aa26.11■■□□□ 1.77
BRF1-216ENST00000550208 CCL5P13501 91 aa26.1■■□□□ 1.77
BRF1-216ENST00000550208 RBM25P49756 843 aaKnown RBP26.1■■□□□ 1.77
BRF1-216ENST00000550208 CCT2P78371 535 aaKnown RBP26.1■■□□□ 1.77
BRF1-216ENST00000550208 CACNB2Q08289 660 aaPredicted RBP26.1■■□□□ 1.77
BRF1-216ENST00000550208 FUT2Q10981 343 aa26.1■■□□□ 1.77
BRF1-216ENST00000550208 PPP2R5BQ15173 497 aa26.1■■□□□ 1.77
BRF1-216ENST00000550208 MFSD14CQ5VZR4 134 aa26.1■■□□□ 1.77
BRF1-216ENST00000550208 FAM133AQ8N9E0 248 aa26.1■■□□□ 1.77
BRF1-216ENST00000550208 FGD4Q96M96 766 aa26.1■■□□□ 1.77
BRF1-216ENST00000550208 BACH2Q9BYV9 841 aa26.1■■□□□ 1.77
BRF1-216ENST00000550208 UNC93B1Q9H1C4 597 aa26.1■■□□□ 1.77
BRF1-216ENST00000550208 PFASO15067 1338 aa26.1■■□□□ 1.77
BRF1-216ENST00000550208 HTTP42858 3142 aa26.09■■□□□ 1.77
BRF1-216ENST00000550208 PTPDC1A2A3K4 754 aa26.09■■□□□ 1.77
BRF1-216ENST00000550208 SOWAHBA6NEL2 793 aa26.09■■□□□ 1.77
BRF1-216ENST00000550208 AK2P54819 239 aa26.09■■□□□ 1.77
BRF1-216ENST00000550208 RNF207Q6ZRF8 634 aa26.09■■□□□ 1.77
BRF1-216ENST00000550208 RGS22Q8NE09 1264 aa26.09■■□□□ 1.77
BRF1-216ENST00000550208 ZNF274Q96GC6 653 aaPredicted RBP26.09■■□□□ 1.77
BRF1-216ENST00000550208 CCDC196A0A1B0GTZ2 297 aa26.08■■□□□ 1.77
BRF1-216ENST00000550208 PRKAR2AP13861 404 aaKnown RBP26.08■■□□□ 1.77
BRF1-216ENST00000550208 MAP3K21Q5TCX8 1036 aa26.08■■□□□ 1.77
BRF1-216ENST00000550208 TINF2Q9BSI4 451 aa26.08■■□□□ 1.77
BRF1-216ENST00000550208 RNF208Q9H0X6 261 aa26.08■■□□□ 1.77
BRF1-216ENST00000550208 UPF2Q9HAU5 1272 aaKnown RBP26.08■■□□□ 1.77
BRF1-216ENST00000550208 NCOA5Q9HCD5 579 aaKnown RBP26.08■■□□□ 1.77
BRF1-216ENST00000550208 V9GY48 417 aaPredicted RBP26.08■■□□□ 1.77
BRF1-216ENST00000550208 PLXNA1Q9UIW2 1896 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 OPLAHO14841 1288 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 CAPN15O75808 1086 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 CALML3P27482 149 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 RPS6P62753 249 aaKnown RBP26.07■■□□□ 1.76
BRF1-216ENST00000550208 STK3Q13188 491 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 PRAMEF19Q5SWL8 479 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 SLC30A10Q6XR72 485 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 TMEM106CQ9BVX2 250 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 SEC63Q9UGP8 760 aaKnown RBP26.07■■□□□ 1.76
BRF1-216ENST00000550208 TPCN1Q9ULQ1 816 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 CNTNAP5Q8WYK1 1306 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 NID2Q14112 1375 aa26.07■■□□□ 1.76
BRF1-216ENST00000550208 TRAF1Q13077 416 aa26.06■■□□□ 1.76
BRF1-216ENST00000550208 ZNF467Q7Z7K2 595 aaPredicted RBP26.06■■□□□ 1.76
BRF1-216ENST00000550208 MCF2L2Q86YR7 1114 aa26.06■■□□□ 1.76
BRF1-216ENST00000550208 TRPV1Q8NER1 839 aa26.06■■□□□ 1.76
BRF1-216ENST00000550208 RPTORQ8N122 1335 aa26.06■■□□□ 1.76
BRF1-216ENST00000550208 CCND3P30281 292 aaPredicted RBP26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms