RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 UBXN4Q92575 508 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 MAP4K1Q92918 833 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 NXPE3Q969Y0 559 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 DDX11Q96FC9 970 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 PPP1R13BQ96KQ4 1090 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 ZKSCAN3Q9BRR0 538 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 USP44Q9H0E7 712 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 IL25Q9H293 177 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 CCDC87Q9NVE4 849 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 ZNF446Q9NWS9 450 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 ORC3Q9UBD5 711 aaPredicted RBP4.37□□□□□ -1.71
RAB5B-207ENST00000549915 NRBP1Q9UHY1 535 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 DCTN4Q9UJW0 460 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 RCOR1Q9UKL0 485 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 TPCN1Q9ULQ1 816 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 RBM8AQ9Y5S9 174 aaKnown RBP4.37□□□□□ -1.71
RAB5B-207ENST00000549915 IGSF1Q8N6C5 1336 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 ADCY9O60503 1353 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 NPHP4O75161 1426 aaPredicted RBP4.37□□□□□ -1.71
RAB5B-207ENST00000549915 USP6P35125 1406 aa4.37□□□□□ -1.71
RAB5B-207ENST00000549915 RIMS1Q86UR5 1692 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 A0A1W2PQ27 194 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 A0A1W2PQ64 194 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 A0A1W2PQD8 194 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 CCDC151A5D8V7 595 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 ERICH4A6NGS2 130 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 A6NHS1 94 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 SOWAHDA6NJG2 315 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 H3BQV1 296 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 NFKBIEO00221 500 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 IKBKBO14920 756 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 SLC27A2O14975 620 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 SART1O43290 800 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 ZSCAN12O43309 604 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 RPS6KA5O75582 802 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 EIF3JO75822 258 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 ALDH1L1O75891 902 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 HMGB1P09429 215 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 CASQ1P31415 396 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 TNNT3P45378 269 aaPredicted RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 TUBB2AQ13885 445 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 BRD3Q15059 726 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 ZRSR1Q15695 479 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 CAMK4Q16566 473 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 ZSCAN26Q16670 478 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 ERCC6LQ2NKX8 1250 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 KIAA0319Q5VV43 1072 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 E4F1Q66K89 784 aaPredicted RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 PRPF40BQ6NWY9 871 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 FDX2Q6P4F2 183 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 CWC27Q6UX04 472 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 PRR23CQ6ZRP0 262 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 MCM10Q7L590 875 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 PPP1R42Q7Z4L9 355 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 ZSCAN29Q8IWY8 852 aaPredicted RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 CCAR1Q8IX12 1150 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 DHX40Q8IX18 779 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 FBXO18Q8NFZ0 1043 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 SMARCC2Q8TAQ2 1214 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 GTF3C6Q969F1 213 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 PGBD1Q96JS3 809 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 TUBB2BQ9BVA1 445 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 YIPF2Q9BWQ6 316 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 FAM107BQ9H098 131 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 GEMIN8Q9NWZ8 242 aaKnown RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 FOXD3Q9UJU5 478 aaPredicted RBP4.36□□□□□ -1.71
RAB5B-207ENST00000549915 SPG7Q9UQ90 795 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 MYH15Q9Y2K3 1946 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 OVOS2A0A0G2JMS6 1433 aa4.36□□□□□ -1.71
RAB5B-207ENST00000549915 CFAP65Q6ZU64 1925 aaKnown RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 A0A1B0GUL7 405 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 MEGF11A6BM72 1044 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 USP27XA6NNY8 438 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 SRGAP3O43295 1099 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 YEATS4O95619 227 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 CYP11A1P05108 521 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 XRCC5P13010 732 aaKnown RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 OAS2P29728 719 aaKnown RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 PTH1RQ03431 593 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 RRS1Q15050 365 aaKnown RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 ADCK5Q3MIX3 580 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 RPS26P11Q5JNZ5 115 aaPredicted RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 ZMYM1Q5SVZ6 1142 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 NUTM2GQ5VZR2 741 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 USPL1Q5W0Q7 1092 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 SYT10Q6XYQ8 523 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 LEKR1Q6ZMV7 388 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 C11orf57Q6ZUT1 292 aaPredicted RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 FERMT3Q86UX7 667 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 CCNJLQ8IV13 435 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 AOPEPQ8N6M6 819 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 ENGASEQ8NFI3 743 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 GIMAP7Q8NHV1 300 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 KCNG4Q8TDN1 519 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 ASAP3Q8TDY4 903 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 HNRNPLLQ8WVV9 542 aaKnown RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 MRPS27Q92552 414 aaKnown RBP4.35□□□□□ -1.71
RAB5B-207ENST00000549915 RABGGTAQ92696 567 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 BRF1Q92994 677 aa4.35□□□□□ -1.71
RAB5B-207ENST00000549915 RUSC1Q9BVN2 902 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms