RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 ZNF790Q6PG37 636 aa8.3□□□□□ -1.08
UBE2N-204ENST00000549833 HDXQ7Z353 690 aa8.3□□□□□ -1.08
UBE2N-204ENST00000549833 SMYD4Q8IYR2 804 aaPredicted RBP8.3□□□□□ -1.08
UBE2N-204ENST00000549833 TTC5Q8N0Z6 440 aa8.3□□□□□ -1.08
UBE2N-204ENST00000549833 GIMAP7Q8NHV1 300 aa8.3□□□□□ -1.08
UBE2N-204ENST00000549833 ZNF496Q96IT1 587 aaPredicted RBP8.3□□□□□ -1.08
UBE2N-204ENST00000549833 TMEM74Q96NL1 305 aa8.3□□□□□ -1.08
UBE2N-204ENST00000549833 TSPYL4Q9UJ04 414 aa8.3□□□□□ -1.08
UBE2N-204ENST00000549833 TLR6Q9Y2C9 796 aa8.3□□□□□ -1.08
UBE2N-204ENST00000549833 ZNF853P0CG23 659 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 ITGB7P26010 798 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 LMNB2Q03252 620 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 PTPN11Q06124 597 aaPredicted RBP8.29□□□□□ -1.08
UBE2N-204ENST00000549833 ITPK1Q13572 414 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 PPM1JQ5JR12 505 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 WIPI1Q5MNZ9 446 aaPredicted RBP8.29□□□□□ -1.08
UBE2N-204ENST00000549833 LRFN4Q6PJG9 635 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 ERMP1Q7Z2K6 904 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 RHOVQ96L33 236 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 CSADQ9Y600 493 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 SNCAIPQ9Y6H5 919 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 CASZ1Q86V15 1759 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 ZNF521Q96K83 1311 aa8.29□□□□□ -1.08
UBE2N-204ENST00000549833 HEG1Q9ULI3 1381 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 PRAMEF22A3QJZ6 481 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 F6X3S4 739 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 CHL1O00533 1208 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 ZNF76P36508 570 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 EIF4A1P60842 406 aaKnown RBP8.28□□□□□ -1.08
UBE2N-204ENST00000549833 GNAI1P63096 354 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 CALD1Q05682 793 aaKnown RBP8.28□□□□□ -1.08
UBE2N-204ENST00000549833 KRT24Q2M2I5 525 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.28□□□□□ -1.08
UBE2N-204ENST00000549833 CCDC84Q86UT8 332 aaPredicted RBP8.28□□□□□ -1.08
UBE2N-204ENST00000549833 C12orf40Q86WS4 652 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 WDR63Q8IWG1 891 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 DNAJC10Q8IXB1 793 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 NGEFQ8N5V2 710 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 LINC00116Q8NCU8 138 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 TSR2Q969E8 191 aaKnown RBP8.28□□□□□ -1.08
UBE2N-204ENST00000549833 PLPPR2Q96GM1 343 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 MFSD14AQ96MC6 490 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 TBC1D32Q96NH3 1257 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 FMNL2Q96PY5 1086 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 SSU72Q9NP77 194 aaKnown RBP8.28□□□□□ -1.08
UBE2N-204ENST00000549833 METTL5Q9NRN9 209 aaKnown RBP8.28□□□□□ -1.08
UBE2N-204ENST00000549833 IFT57Q9NWB7 429 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 PRKAG2Q9UGJ0 569 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 GGT7Q9UJ14 662 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 IL16Q14005 1332 aa8.28□□□□□ -1.08
UBE2N-204ENST00000549833 BCORQ6W2J9 1755 aa8.27□□□□□ -1.08
UBE2N-204ENST00000549833 AFDNP55196 1824 aaKnown RBP8.27□□□□□ -1.09
UBE2N-204ENST00000549833 PRAMEF27A3QJZ7 478 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 FANCGO15287 622 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 BPNT1O95861 308 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 CAMK2GQ13555 558 aaPredicted RBP8.27□□□□□ -1.09
UBE2N-204ENST00000549833 ZNF827Q17R98 1081 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 SNAP47Q5SQN1 464 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 ZBTB37Q5TC79 503 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 KCT2Q8NC54 265 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 ISL2Q96A47 359 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 KBTBD4Q9NVX7 518 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 BABAM1Q9NWV8 329 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 PCOLCE2Q9UKZ9 415 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 ANKRD36CQ5JPF3 1778 aa8.27□□□□□ -1.09
UBE2N-204ENST00000549833 PF4P02776 101 aa8.26□□□□□ -1.09
UBE2N-204ENST00000549833 RPL6Q02878 288 aaKnown RBP8.26□□□□□ -1.09
UBE2N-204ENST00000549833 RING1Q06587 406 aa8.26□□□□□ -1.09
UBE2N-204ENST00000549833 INPP5AQ14642 412 aa8.26□□□□□ -1.09
UBE2N-204ENST00000549833 SMIM5Q71RC9 77 aa8.26□□□□□ -1.09
UBE2N-204ENST00000549833 FBXL6Q8N531 539 aa8.26□□□□□ -1.09
UBE2N-204ENST00000549833 JARID2Q92833 1246 aaPredicted RBP8.26□□□□□ -1.09
UBE2N-204ENST00000549833 FANCIQ9NVI1 1328 aa8.26□□□□□ -1.09
UBE2N-204ENST00000549833 COL24A1Q17RW2 1714 aa8.26□□□□□ -1.09
UBE2N-204ENST00000549833 ARFGEF2Q9Y6D5 1785 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 MINDY4BA8MYZ0 360 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 ELL2O00472 640 aaPredicted RBP8.25□□□□□ -1.09
UBE2N-204ENST00000549833 SCAMP3O14828 347 aaKnown RBP8.25□□□□□ -1.09
UBE2N-204ENST00000549833 SNRPA1P09661 255 aaKnown RBP8.25□□□□□ -1.09
UBE2N-204ENST00000549833 CYP19A1P11511 503 aaPredicted RBP8.25□□□□□ -1.09
UBE2N-204ENST00000549833 CRKLP46109 303 aaKnown RBP8.25□□□□□ -1.09
UBE2N-204ENST00000549833 CPSF6Q16630 551 aaKnown RBP eCLIP8.25□□□□□ -1.09
UBE2N-204ENST00000549833 LDLRAD1Q5T700 205 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 CDC37L1Q7L3B6 337 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 CYFIP1Q7L576 1253 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 ZAR1Q86SH2 424 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 AMIGO3Q86WK7 504 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.25□□□□□ -1.09
UBE2N-204ENST00000549833 SHKBP1Q8TBC3 707 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 YTHDC1Q96MU7 727 aaKnown RBP8.25□□□□□ -1.09
UBE2N-204ENST00000549833 METTL22Q9BUU2 404 aaPredicted RBP8.25□□□□□ -1.09
UBE2N-204ENST00000549833 STK32BQ9NY57 414 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 USP16Q9Y5T5 823 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 TACC3Q9Y6A5 838 aa8.25□□□□□ -1.09
UBE2N-204ENST00000549833 SCN7AQ01118 1682 aa8.24□□□□□ -1.09
UBE2N-204ENST00000549833 WDR64B1ANS9 1081 aa8.24□□□□□ -1.09
UBE2N-204ENST00000549833 DYNC1LI2O43237 492 aaPredicted RBP8.24□□□□□ -1.09
UBE2N-204ENST00000549833 A1BGP04217 495 aa8.24□□□□□ -1.09
UBE2N-204ENST00000549833 PIP4K2AP48426 406 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms