RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 YBX1P67809 324 aaKnown RBP6.18□□□□□ -1.42
SNRPF-202ENST00000549580 ADAM17P78536 824 aa6.18□□□□□ -1.42
SNRPF-202ENST00000549580 EGFLAMQ63HQ2 1017 aa6.18□□□□□ -1.42
SNRPF-202ENST00000549580 MAP6Q96JE9 813 aa6.18□□□□□ -1.42
SNRPF-202ENST00000549580 HHIPL1Q96JK4 782 aa6.18□□□□□ -1.42
SNRPF-202ENST00000549580 FERD3LQ96RJ6 166 aa6.18□□□□□ -1.42
SNRPF-202ENST00000549580 TRIM55Q9BYV6 548 aa6.18□□□□□ -1.42
SNRPF-202ENST00000549580 KLHL14Q9P2G3 628 aa6.18□□□□□ -1.42
SNRPF-202ENST00000549580 POLR3KQ9Y2Y1 108 aaPredicted RBP6.18□□□□□ -1.42
SNRPF-202ENST00000549580 MSRB2Q9Y3D2 182 aa6.18□□□□□ -1.42
SNRPF-202ENST00000549580 TMEM82A0PJX8 343 aa6.17□□□□□ -1.42
SNRPF-202ENST00000549580 GRIN3BO60391 1043 aa6.17□□□□□ -1.42
SNRPF-202ENST00000549580 FKTNO75072 461 aa6.17□□□□□ -1.42
SNRPF-202ENST00000549580 BPNT1O95861 308 aa6.17□□□□□ -1.42
SNRPF-202ENST00000549580 LDHDQ86WU2 507 aa6.17□□□□□ -1.42
SNRPF-202ENST00000549580 CRBNQ96SW2 442 aa6.17□□□□□ -1.42
SNRPF-202ENST00000549580 MENTQ9BUN1 341 aa6.17□□□□□ -1.42
SNRPF-202ENST00000549580 CRTAC1Q9NQ79 661 aa6.17□□□□□ -1.42
SNRPF-202ENST00000549580 PRR36Q9H6K5 1346 aa6.17□□□□□ -1.42
SNRPF-202ENST00000549580 U2SURPO15042 1029 aaKnown RBP6.16□□□□□ -1.42
SNRPF-202ENST00000549580 CASP7P55210 303 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 RASA3Q14644 834 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 ZNF662Q6ZS27 426 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 GK5Q6ZS86 529 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 CELF2-AS1Q8N7Q2 184 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 DEPDC7Q96QD5 511 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 CCDC113Q9H0I3 377 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 SNTG2Q9NY99 539 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 KLHL3Q9UH77 587 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 R3HCC1Q9Y3T6 440 aaKnown RBP6.16□□□□□ -1.42
SNRPF-202ENST00000549580 PCDHB14Q9Y5E9 798 aa6.16□□□□□ -1.42
SNRPF-202ENST00000549580 FAM221BA6H8Z2 402 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 FFAR3O14843 346 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 DNAJA2O60884 412 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 FSHBP01225 129 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 PNLIPP16233 465 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 NCLP19338 710 aaKnown RBP6.15□□□□□ -1.42
SNRPF-202ENST00000549580 YARSP54577 528 aaKnown RBP6.15□□□□□ -1.42
SNRPF-202ENST00000549580 SLURP1P55000 103 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 CAP1Q01518 475 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 NMIQ13287 307 aaPredicted RBP6.15□□□□□ -1.42
SNRPF-202ENST00000549580 TCEAL1Q15170 157 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 TMC6Q7Z403 805 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 TMC3Q7Z5M5 1100 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 LSRQ86X29 649 aaPredicted RBP6.15□□□□□ -1.42
SNRPF-202ENST00000549580 ADGRG2Q8IZP9 1017 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 C19orf47Q8N9M1 422 aaKnown RBP6.15□□□□□ -1.42
SNRPF-202ENST00000549580 SRPK1Q96SB4 655 aaKnown RBP6.15□□□□□ -1.42
SNRPF-202ENST00000549580 KIF2CQ99661 725 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 HDAC8Q9BY41 377 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 ACTR10Q9NZ32 417 aa6.15□□□□□ -1.42
SNRPF-202ENST00000549580 MRPL42Q9Y6G3 142 aaKnown RBP6.15□□□□□ -1.42
SNRPF-202ENST00000549580 ANKRD62A6NC57 917 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 MEIS3P2A8K0S8 358 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 C1QTNF3-AMACRE9PGA6 284 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 KCNC1P48547 511 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 TMEM201Q5SNT2 666 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 FBXW10Q5XX13 1052 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 RNF111Q6ZNA4 994 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 SLFN12Q8IYM2 578 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 TCTN2Q96GX1 697 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 RNPC3Q96LT9 517 aaKnown RBP6.14□□□□□ -1.43
SNRPF-202ENST00000549580 ASPNQ9BXN1 380 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 SCAND2PQ9GZW5 306 aaPredicted RBP6.14□□□□□ -1.43
SNRPF-202ENST00000549580 TCFL5Q9UL49 500 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 MINPP1Q9UNW1 487 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 PCDHA5Q9Y5H7 936 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 SBNO2Q9Y2G9 1366 aa6.14□□□□□ -1.43
SNRPF-202ENST00000549580 A0A1B0GTL3 188 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 NUDT19A8MXV4 375 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 ENPP3O14638 875 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 BUB1BO60566 1050 aaPredicted RBP6.13□□□□□ -1.43
SNRPF-202ENST00000549580 HSD3B2P26439 372 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 KIR2DL1P43626 348 aaPredicted RBP6.13□□□□□ -1.43
SNRPF-202ENST00000549580 KIR2DL2P43627 348 aaPredicted RBP6.13□□□□□ -1.43
SNRPF-202ENST00000549580 LIMS1P48059 325 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 HMGA2P52926 109 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 RTP1P59025 263 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 ERVFRD-1P60508 538 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 SNW1Q13573 536 aaKnown RBP6.13□□□□□ -1.43
SNRPF-202ENST00000549580 DDR2Q16832 855 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 FERMT3Q86UX7 667 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 REV1Q9UBZ9 1251 aa6.13□□□□□ -1.43
SNRPF-202ENST00000549580 HTR3BO95264 441 aa6.12□□□□□ -1.43
SNRPF-202ENST00000549580 RAB3GAP1Q15042 981 aa6.12□□□□□ -1.43
SNRPF-202ENST00000549580 LRRFIP1Q32MZ4 808 aaKnown RBP6.12□□□□□ -1.43
SNRPF-202ENST00000549580 BBS9Q3SYG4 887 aa6.12□□□□□ -1.43
SNRPF-202ENST00000549580 UBXN11Q5T124 520 aa6.12□□□□□ -1.43
SNRPF-202ENST00000549580 TAB3Q8N5C8 712 aaPredicted RBP6.12□□□□□ -1.43
SNRPF-202ENST00000549580 SYTL5Q8TDW5 730 aaPredicted RBP6.12□□□□□ -1.43
SNRPF-202ENST00000549580 CCDC74BQ96LY2 380 aa6.12□□□□□ -1.43
SNRPF-202ENST00000549580 SLPIP03973 132 aa6.11□□□□□ -1.43
SNRPF-202ENST00000549580 SYPP08247 313 aa6.11□□□□□ -1.43
SNRPF-202ENST00000549580 RASGRF1Q13972 1273 aa6.11□□□□□ -1.43
SNRPF-202ENST00000549580 FXNQ16595 210 aa6.11□□□□□ -1.43
SNRPF-202ENST00000549580 HSF5Q4G112 596 aaPredicted RBP6.11□□□□□ -1.43
SNRPF-202ENST00000549580 OLFML2BQ68BL8 750 aa6.11□□□□□ -1.43
SNRPF-202ENST00000549580 PHACTR4Q8IZ21 702 aa6.11□□□□□ -1.43
SNRPF-202ENST00000549580 TM9SF2Q99805 663 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms