RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 KIF28PB7ZC32 967 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 PIK3CDO00329 1044 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 BMP15O95972 392 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 FOSP01100 380 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-211ENST00000549226 ZNF157P51786 506 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-211ENST00000549226 TREML2Q5T2D2 321 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 CCDC174Q6PII3 467 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 ZNF784Q8NCA9 323 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-211ENST00000549226 ATG4CQ96DT6 458 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 MS4A4AQ96JQ5 239 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 TEX13BQ9BXU2 312 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-211ENST00000549226 CEP131Q9UPN4 1083 aa16.2■□□□□ 0.18
CACNB3-211ENST00000549226 MYH6P13533 1939 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 BAZ2BQ9UIF8 2168 aaKnown RBP16.19■□□□□ 0.18
CACNB3-211ENST00000549226 CCL15-CCL14A0A0B4J2E2 113 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 TESPA1A2RU30 521 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-211ENST00000549226 INHBEP58166 350 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 GHRHRQ02643 423 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 DNM1Q05193 864 aaKnown RBP16.19■□□□□ 0.18
CACNB3-211ENST00000549226 NR5A1Q13285 461 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 ORC2Q13416 577 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-211ENST00000549226 CCL15Q16663 113 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 USH1GQ495M9 461 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 GPAT2Q6NUI2 795 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 TMEM87AQ8NBN3 555 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 REPS2Q8NFH8 660 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 POLR3EQ9NVU0 708 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 PCDHA6Q9UN73 950 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 PCDHA8Q9Y5H6 950 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 MORC2Q9Y6X9 1032 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-211ENST00000549226 ZNF536O15090 1300 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 ELP1O95163 1332 aa16.19■□□□□ 0.18
CACNB3-211ENST00000549226 YEATS4O95619 227 aa16.18■□□□□ 0.18
CACNB3-211ENST00000549226 SLC10A3P09131 477 aa16.18■□□□□ 0.18
CACNB3-211ENST00000549226 MCM4P33991 863 aa16.18■□□□□ 0.18
CACNB3-211ENST00000549226 CLK2P49760 499 aaKnown RBP16.18■□□□□ 0.18
CACNB3-211ENST00000549226 NONOQ15233 471 aaKnown RBP eCLIP16.18■□□□□ 0.18
CACNB3-211ENST00000549226 SAMD1Q6SPF0 538 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-211ENST00000549226 OXER1Q8TDS5 423 aa16.18■□□□□ 0.18
CACNB3-211ENST00000549226 NAP1L4Q99733 375 aaKnown RBP16.18■□□□□ 0.18
CACNB3-211ENST00000549226 ASCC2Q9H1I8 757 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-211ENST00000549226 RTEL1Q9NZ71 1219 aa16.18■□□□□ 0.18
CACNB3-211ENST00000549226 GCOM1H8Y6P7 765 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-211ENST00000549226 POLR2MP0CAP2 368 aa16.17■□□□□ 0.18
CACNB3-211ENST00000549226 NCLP19338 710 aaKnown RBP16.17■□□□□ 0.18
CACNB3-211ENST00000549226 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-211ENST00000549226 SNAP25P60880 206 aa16.17■□□□□ 0.18
CACNB3-211ENST00000549226 HERVK_113P62684 666 aa16.17■□□□□ 0.18
CACNB3-211ENST00000549226 KCNG4Q8TDN1 519 aa16.17■□□□□ 0.18
CACNB3-211ENST00000549226 BRI3BPQ8WY22 251 aa16.17■□□□□ 0.18
CACNB3-211ENST00000549226 PARK7Q99497 189 aaKnown RBP16.17■□□□□ 0.18
CACNB3-211ENST00000549226 EHMT1Q9H9B1 1298 aa16.17■□□□□ 0.18
CACNB3-211ENST00000549226 FBXO40Q9UH90 709 aa16.17■□□□□ 0.18
CACNB3-211ENST00000549226 ZNF214Q9UL59 606 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-211ENST00000549226 ABT1Q9ULW3 272 aaKnown RBP16.17■□□□□ 0.18
CACNB3-211ENST00000549226 RABGAP1Q9Y3P9 1069 aa16.17■□□□□ 0.18
CACNB3-211ENST00000549226 PTPRFP10586 1907 aa16.17■□□□□ 0.18
CACNB3-211ENST00000549226 SPDYE3A6NKU9 549 aa16.16■□□□□ 0.18
CACNB3-211ENST00000549226 STAT3P40763 770 aa16.16■□□□□ 0.18
CACNB3-211ENST00000549226 GCLCP48506 637 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-211ENST00000549226 SREBF2Q12772 1141 aa16.16■□□□□ 0.18
CACNB3-211ENST00000549226 TMEM132BQ14DG7 1078 aa16.16■□□□□ 0.18
CACNB3-211ENST00000549226 PIK3AP1Q6ZUJ8 805 aa16.16■□□□□ 0.18
CACNB3-211ENST00000549226 REM2Q8IYK8 340 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-211ENST00000549226 JMYQ8N9B5 988 aa16.16■□□□□ 0.18
CACNB3-211ENST00000549226 CHST13Q8NET6 341 aa16.16■□□□□ 0.18
CACNB3-211ENST00000549226 AGBL1Q96MI9 1066 aa16.16■□□□□ 0.18
CACNB3-211ENST00000549226 RAVER2Q9HCJ3 691 aaKnown RBP16.16■□□□□ 0.18
CACNB3-211ENST00000549226 BTBD19C9JJ37 291 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 PDHXO00330 501 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 MEIS2O14770 477 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 SLC25A27O95847 323 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 FOXD4L6Q3SYB3 417 aaPredicted RBP16.15■□□□□ 0.18
CACNB3-211ENST00000549226 ANO1Q5XXA6 986 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 SNRNP48Q6IEG0 339 aaKnown RBP16.15■□□□□ 0.18
CACNB3-211ENST00000549226 FOXD4L3Q6VB84 417 aaPredicted RBP16.15■□□□□ 0.18
CACNB3-211ENST00000549226 RIOX2Q8IUF8 465 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 CPXCR1Q8N123 301 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 USP28Q96RU2 1077 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
CACNB3-211ENST00000549226 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 RCOR1Q9UKL0 485 aa16.15■□□□□ 0.18
CACNB3-211ENST00000549226 FIBPO43427 364 aa16.14■□□□□ 0.17
CACNB3-211ENST00000549226 ALAS1P13196 640 aa16.14■□□□□ 0.17
CACNB3-211ENST00000549226 GCFC2P16383 781 aaKnown RBP16.14■□□□□ 0.17
CACNB3-211ENST00000549226 HSD17B4P51659 736 aa16.14■□□□□ 0.17
CACNB3-211ENST00000549226 NFKBIBQ15653 356 aa16.14■□□□□ 0.17
CACNB3-211ENST00000549226 TTC38Q5R3I4 469 aa16.14■□□□□ 0.17
CACNB3-211ENST00000549226 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
CACNB3-211ENST00000549226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.14■□□□□ 0.17
CACNB3-211ENST00000549226 NEK8Q86SG6 692 aa16.14■□□□□ 0.17
CACNB3-211ENST00000549226 SMCR8Q8TEV9 937 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-211ENST00000549226 LEO1Q8WVC0 666 aaPredicted RBP16.14■□□□□ 0.17
CACNB3-211ENST00000549226 CLEC4DQ8WXI8 215 aa16.14■□□□□ 0.17
CACNB3-211ENST00000549226 TRERF1Q96PN7 1200 aa16.14■□□□□ 0.17
CACNB3-211ENST00000549226 SPATC1LQ9H0A9 340 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms