RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 TMX2Q9Y320 296 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 PTPRZ1P23471 2315 aaPredicted RBP10.16□□□□□ -0.78
TROAP-208ENST00000548817 C5orf42Q9H799 3197 aa10.16□□□□□ -0.78
TROAP-208ENST00000548817 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 GFRA3O60609 400 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 BAIAP3O94812 1187 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 CDK8P49336 464 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 ZP2Q05996 745 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 CCDC144BQ3MJ40 725 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.15□□□□□ -0.78
TROAP-208ENST00000548817 PRSS33Q8NF86 280 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 NEK9Q8TD19 979 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 DDX11Q96FC9 970 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 PHOX2BQ99453 314 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 KANSL2Q9H9L4 492 aa10.15□□□□□ -0.78
TROAP-208ENST00000548817 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.15□□□□□ -0.78
TROAP-208ENST00000548817 ZNF214Q9UL59 606 aaPredicted RBP10.15□□□□□ -0.78
TROAP-208ENST00000548817 CTDP1Q9Y5B0 961 aaPredicted RBP10.15□□□□□ -0.78
TROAP-208ENST00000548817 TNKSO95271 1327 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 TCRBV5S4A2TA0A5A2 114 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 USP17L12C9JPN9 530 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 USP17L21D6R901 530 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 ADCY6O43306 1168 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 PRKAB2O43741 272 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 ZEB2O60315 1214 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 B4GALT4O60513 344 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 ARHGEF15O94989 841 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 AKR1B1P15121 316 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 ATP5JP18859 108 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 ADD2P35612 726 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 IRX5P78411 483 aaPredicted RBP10.14□□□□□ -0.79
TROAP-208ENST00000548817 C12orf60Q5U649 245 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 CXCL17Q6UXB2 119 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 SCLYQ96I15 445 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 TEX13BQ9BXU2 312 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 TRPV6Q9H1D0 765 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 COG6Q9Y2V7 657 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 SLC4A4Q9Y6R1 1079 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 CACNA1BQ00975 2339 aa10.14□□□□□ -0.79
TROAP-208ENST00000548817 RIF1Q5UIP0 2472 aaKnown RBP10.14□□□□□ -0.79
TROAP-208ENST00000548817 BAZ2AQ9UIF9 1905 aaKnown RBP10.13□□□□□ -0.79
TROAP-208ENST00000548817 ZBED9Q6R2W3 1325 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 TANC1Q9C0D5 1861 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 EPG5Q9HCE0 2579 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 VWA5AO00534 786 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 EEF2P13639 858 aaKnown RBP10.13□□□□□ -0.79
TROAP-208ENST00000548817 EVX2Q03828 476 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 UBE3CQ15386 1083 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 FSCN1Q16658 493 aaKnown RBP10.13□□□□□ -0.79
TROAP-208ENST00000548817 HERC4Q5GLZ8 1057 aaPredicted RBP10.13□□□□□ -0.79
TROAP-208ENST00000548817 KIAA1755Q5JYT7 1200 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 C16orf86Q6ZW13 317 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 ADHFE1Q8IWW8 467 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 MIER1Q8N108 512 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 POP1Q99575 1024 aaKnown RBP10.13□□□□□ -0.79
TROAP-208ENST00000548817 HAUS7Q99871 368 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 MKNK2Q9HBH9 465 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 PPP1R9AQ9ULJ8 1098 aa10.13□□□□□ -0.79
TROAP-208ENST00000548817 FAM186AA6NE01 2351 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 TECTAO75443 2155 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 GRIN2DO15399 1336 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 MCM3APO60318 1980 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 CYP2D7A0A087X1C5 515 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 PITPNM1O00562 1244 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 ERVK-21P61565 698 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 CLEC10AQ8IUN9 316 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 REPS2Q8NFH8 660 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 GDPD5Q8WTR4 605 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 GPATCH3Q96I76 525 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 TGS1Q96RS0 853 aaKnown RBP10.12□□□□□ -0.79
TROAP-208ENST00000548817 LRRCC1Q9C099 1032 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 ALDH8A1Q9H2A2 487 aaPredicted RBP10.12□□□□□ -0.79
TROAP-208ENST00000548817 SUGCTQ9HAC7 445 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 ZNF287Q9HBT7 754 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 ZBTB40Q9NUA8 1239 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 ARPP21Q9UBL0 812 aaPredicted RBP10.12□□□□□ -0.79
TROAP-208ENST00000548817 CTNNA3Q9UI47 895 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 SIP14410 1827 aa10.12□□□□□ -0.79
TROAP-208ENST00000548817 SCN5AQ14524 2016 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 MINDY4BA8MYZ0 360 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 ATP2A1O14983 1001 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 ZBED4O75132 1171 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 KCNJ6P48051 423 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 BEX3Q00994 111 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 TNFAIP2Q03169 654 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 LRRFIP1Q32MZ4 808 aaKnown RBP10.11□□□□□ -0.79
TROAP-208ENST00000548817 TIGD5Q53EQ6 642 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 FAM83BQ5T0W9 1011 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 DIEXFQ68CQ4 756 aaKnown RBP10.11□□□□□ -0.79
TROAP-208ENST00000548817 ARMCX2Q7L311 632 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 DEFB128Q7Z7B8 93 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 TLK2Q86UE8 772 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 SIAH1Q8IUQ4 282 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 SUGP1Q8IWZ8 645 aaKnown RBP10.11□□□□□ -0.79
TROAP-208ENST00000548817 SLF1Q9BQI6 1058 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 KATNBL1Q9H079 304 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 AP5M1Q9H0R1 490 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 FBXO40Q9UH90 709 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 GNEQ9Y223 722 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms