RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 ZNF572Q7Z3I7 529 aaPredicted RBP11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 FBXO33Q7Z6M2 555 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 CAGE1Q8TC20 777 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 CAPZA3Q96KX2 299 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 TMEM60Q9H2L4 133 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 KAT14Q9H8E8 782 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 PCDHA6Q9UN73 950 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 TFR2Q9UP52 801 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 PCDHA8Q9Y5H6 950 aa11.04□□□□□ -0.64
SMARCD1-205ENST00000548573 DOT1LQ8TEK3 1739 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 NUTM2BA6NNL0 878 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 PP2D1A8MPX8 630 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 NUTM2EB1AL46 878 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 HNRNPH3P31942 346 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 MAGEA9P43362 315 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 EVX2Q03828 476 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 GRM4Q14833 912 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 AMOTL1Q8IY63 956 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 MMGT1Q8N4V1 131 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 TRIM58Q8NG06 486 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 SECISBP2LQ93073 1101 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 CNOT6LQ96LI5 555 aaKnown RBP11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 CRACR2AQ9BSW2 395 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 SELENOOQ9BVL4 669 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 EFCC1Q9HA90 598 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 RNF216Q9NWF9 866 aaPredicted RBP11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 JRKLQ9Y4A0 524 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 MAST2Q6P0Q8 1798 aa11.03□□□□□ -0.64
SMARCD1-205ENST00000548573 PDE2AO00408 941 aaPredicted RBP11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 SHOX2O60902 331 aaPredicted RBP11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 SPA17Q15506 151 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 CCDC178Q5BJE1 867 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 FOXR1Q6PIV2 292 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 PNMA1Q8ND90 353 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 RASGRP4Q8TDF6 673 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 GPKOWQ92917 476 aaPredicted RBP eCLIP11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 SMARCC1Q92922 1105 aaPredicted RBP11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 C7orf25Q9BPX7 421 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 RSPH14Q9UHP6 348 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 FAM184BQ9ULE4 1060 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 SNX12Q9UMY4 172 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 MINPP1Q9UNW1 487 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 ZNF652Q9Y2D9 606 aa11.02□□□□□ -0.64
SMARCD1-205ENST00000548573 FLT1P17948 1338 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 AGPSO00116 658 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 USO1O60763 962 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 GGCXP38435 758 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 MTIF2P46199 727 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 CORO7P57737 925 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 PDE4DQ08499 809 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 MIIPQ5JXC2 388 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 FKBP15Q5T1M5 1219 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 ANKRD40Q6AI12 368 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 TYW1BQ6NUM6 668 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 CABP7Q86V35 215 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 AENQ8WTP8 325 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 CCDC42Q96M95 316 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 NOC4LQ9BVI4 516 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 TRIM9Q9C026 710 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 JADE2Q9NQC1 790 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 TCP11L1Q9NUJ3 509 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 BARHL2Q9NY43 387 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 PLAGL2Q9UPG8 496 aa11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 COL14A1Q05707 1796 aaKnown RBP11.02□□□□□ -0.65
SMARCD1-205ENST00000548573 CASZ1Q86V15 1759 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 WTIPA6NIX2 430 aaPredicted RBP11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 ZNF185O15231 689 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 TACC1O75410 805 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 LCA5LO95447 670 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 MYBL2P10244 700 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 CYP2D6P10635 497 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 KLK7P49862 253 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 AMPD3Q01432 767 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 TFAP4Q01664 338 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 INF2Q27J81 1249 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 CREG2Q8IUH2 290 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 LRRC15Q8TF66 581 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 ZBTB9Q96C00 473 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 PCMTD1Q96MG8 357 aaPredicted RBP11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 IL17RBQ9NRM6 502 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 MAD2L2Q9UI95 211 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 WNK3Q9BYP7 1800 aa11.01□□□□□ -0.65
SMARCD1-205ENST00000548573 MACROD2A1Z1Q3 448 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 GOLGA6BA6NDN3 693 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 STXBP3O00186 592 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 ZNF263O14978 683 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 PLCG1P19174 1290 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 STK4Q13043 487 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 CNNM4Q6P4Q7 775 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 CLEC4GQ6UXB4 293 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 STAG2Q8N3U4 1231 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 FAM76AQ8TAV0 307 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 SH2D4AQ9H788 454 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 DUSP10Q9Y6W6 482 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 MYH1P12882 1939 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 ABCB11O95342 1321 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 LOC102724428A0A0B4J2F2 783 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 ZMYND10O75800 440 aa11□□□□□ -0.65
SMARCD1-205ENST00000548573 OR52Z1P0C646 297 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms