RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 RIOX1Q9H6W3 641 aa5.84□□□□□ -1.47
APP-217ENST00000548570 JMJD4Q9H9V9 463 aa5.84□□□□□ -1.47
APP-217ENST00000548570 TXNRD2Q9NNW7 524 aa5.84□□□□□ -1.47
APP-217ENST00000548570 BTBD7Q9P203 1132 aa5.84□□□□□ -1.47
APP-217ENST00000548570 RBM27Q9P2N5 1060 aaKnown RBP5.84□□□□□ -1.47
APP-217ENST00000548570 RBPJLQ9UBG7 517 aa5.84□□□□□ -1.47
APP-217ENST00000548570 PRR12Q9ULL5 1215 aa5.84□□□□□ -1.47
APP-217ENST00000548570 LIMCH1Q9UPQ0 1083 aa5.84□□□□□ -1.47
APP-217ENST00000548570 AGTPBP1Q9UPW5 1226 aa5.84□□□□□ -1.47
APP-217ENST00000548570 RIPK3Q9Y572 518 aa5.84□□□□□ -1.47
APP-217ENST00000548570 SLC12A7Q9Y666 1083 aa5.84□□□□□ -1.47
APP-217ENST00000548570 CNTNAP5Q8WYK1 1306 aa5.83□□□□□ -1.48
APP-217ENST00000548570 ERICH2A1L162 156 aa5.83□□□□□ -1.48
APP-217ENST00000548570 MANSC4A6NHS7 340 aaPredicted RBP5.83□□□□□ -1.48
APP-217ENST00000548570 USP17L15C9J2P7 530 aa5.83□□□□□ -1.48
APP-217ENST00000548570 USP17L13C9JLJ4 530 aa5.83□□□□□ -1.48
APP-217ENST00000548570 USP17L11C9JVI0 530 aa5.83□□□□□ -1.48
APP-217ENST00000548570 KLRF2D3W0D1 207 aa5.83□□□□□ -1.48
APP-217ENST00000548570 USP17L18D6R9N7 530 aa5.83□□□□□ -1.48
APP-217ENST00000548570 USP17L22D6RA61 530 aa5.83□□□□□ -1.48
APP-217ENST00000548570 USP17L17D6RBQ6 530 aa5.83□□□□□ -1.48
APP-217ENST00000548570 USP17L19D6RCP7 530 aa5.83□□□□□ -1.48
APP-217ENST00000548570 USP17L20D6RJB6 530 aa5.83□□□□□ -1.48
APP-217ENST00000548570 PDHXO00330 501 aa5.83□□□□□ -1.48
APP-217ENST00000548570 OPLAHO14841 1288 aa5.83□□□□□ -1.48
APP-217ENST00000548570 PARP1P09874 1014 aaKnown RBP5.83□□□□□ -1.48
APP-217ENST00000548570 CTGFP29279 349 aa5.83□□□□□ -1.48
APP-217ENST00000548570 METAP2P50579 478 aaKnown RBP eCLIP5.83□□□□□ -1.48
APP-217ENST00000548570 USP14P54578 494 aa5.83□□□□□ -1.48
APP-217ENST00000548570 USP17L24Q0WX57 530 aa5.83□□□□□ -1.48
APP-217ENST00000548570 NOGQ13253 232 aa5.83□□□□□ -1.48
APP-217ENST00000548570 GRM1Q13255 1194 aa5.83□□□□□ -1.48
APP-217ENST00000548570 TMEM132BQ14DG7 1078 aa5.83□□□□□ -1.48
APP-217ENST00000548570 SART3Q15020 963 aaKnown RBP5.83□□□□□ -1.48
APP-217ENST00000548570 LBX2Q6XYB7 198 aa5.83□□□□□ -1.48
APP-217ENST00000548570 NFXL1Q6ZNB6 911 aa5.83□□□□□ -1.48
APP-217ENST00000548570 GADL1Q6ZQY3 521 aa5.83□□□□□ -1.48
APP-217ENST00000548570 FASTKD5Q7L8L6 764 aaKnown RBP5.83□□□□□ -1.48
APP-217ENST00000548570 CATIPQ7Z7H3 387 aa5.83□□□□□ -1.48
APP-217ENST00000548570 ADGRF4Q8IZF3 695 aa5.83□□□□□ -1.48
APP-217ENST00000548570 CCDC82Q8N4S0 544 aa5.83□□□□□ -1.48
APP-217ENST00000548570 NSUN7Q8NE18 718 aaKnown RBP5.83□□□□□ -1.48
APP-217ENST00000548570 SMARCC2Q8TAQ2 1214 aa5.83□□□□□ -1.48
APP-217ENST00000548570 PHKBQ93100 1093 aa5.83□□□□□ -1.48
APP-217ENST00000548570 AIFM3Q96NN9 605 aa5.83□□□□□ -1.48
APP-217ENST00000548570 PIGSQ96S52 555 aa5.83□□□□□ -1.48
APP-217ENST00000548570 RANBP17Q9H2T7 1088 aaKnown RBP5.83□□□□□ -1.48
APP-217ENST00000548570 SH2D4AQ9H788 454 aa5.83□□□□□ -1.48
APP-217ENST00000548570 GOPCQ9HD26 462 aa5.83□□□□□ -1.48
APP-217ENST00000548570 GJB4Q9NTQ9 266 aa5.83□□□□□ -1.48
APP-217ENST00000548570 RNF186Q9NXI6 227 aa5.83□□□□□ -1.48
APP-217ENST00000548570 ZNF214Q9UL59 606 aaPredicted RBP5.83□□□□□ -1.48
APP-217ENST00000548570 PPP1R9AQ9ULJ8 1098 aa5.83□□□□□ -1.48
APP-217ENST00000548570 SLC45A1Q9Y2W3 748 aa5.83□□□□□ -1.48
APP-217ENST00000548570 RBM19Q9Y4C8 960 aaKnown RBP5.83□□□□□ -1.48
APP-217ENST00000548570 MYH1P12882 1939 aa5.82□□□□□ -1.48
APP-217ENST00000548570 AK9Q5TCS8 1911 aa5.82□□□□□ -1.48
APP-217ENST00000548570 VWA5AO00534 786 aa5.82□□□□□ -1.48
APP-217ENST00000548570 RAD21O60216 631 aa5.82□□□□□ -1.48
APP-217ENST00000548570 DGAT1O75907 488 aa5.82□□□□□ -1.48
APP-217ENST00000548570 BCRP11274 1271 aa5.82□□□□□ -1.48
APP-217ENST00000548570 IFNAR1P17181 557 aa5.82□□□□□ -1.48
APP-217ENST00000548570 SMARCA1P28370 1054 aa5.82□□□□□ -1.48
APP-217ENST00000548570 MAP2K2P36507 400 aa5.82□□□□□ -1.48
APP-217ENST00000548570 COPS2P61201 443 aa5.82□□□□□ -1.48
APP-217ENST00000548570 HERVK_113P62684 666 aa5.82□□□□□ -1.48
APP-217ENST00000548570 CRHR2Q13324 411 aa5.82□□□□□ -1.48
APP-217ENST00000548570 COG2Q14746 738 aa5.82□□□□□ -1.48
APP-217ENST00000548570 ANKRD1Q15327 319 aa5.82□□□□□ -1.48
APP-217ENST00000548570 NPY5RQ15761 445 aa5.82□□□□□ -1.48
APP-217ENST00000548570 RTN1Q16799 776 aa5.82□□□□□ -1.48
APP-217ENST00000548570 CCDC96Q2M329 555 aa5.82□□□□□ -1.48
APP-217ENST00000548570 ASPRV1Q53RT3 343 aa5.82□□□□□ -1.48
APP-217ENST00000548570 GPATCH4Q5T3I0 446 aaKnown RBP5.82□□□□□ -1.48
APP-217ENST00000548570 SYDE2Q5VT97 1194 aa5.82□□□□□ -1.48
APP-217ENST00000548570 C17orf99Q6UX52 265 aa5.82□□□□□ -1.48
APP-217ENST00000548570 NUDT18Q6ZVK8 323 aa5.82□□□□□ -1.48
APP-217ENST00000548570 CCDC83Q8IWF9 413 aa5.82□□□□□ -1.48
APP-217ENST00000548570 TBC1D5Q92609 795 aa5.82□□□□□ -1.48
APP-217ENST00000548570 AGBL1Q96MI9 1066 aa5.82□□□□□ -1.48
APP-217ENST00000548570 SLF1Q9BQI6 1058 aa5.82□□□□□ -1.48
APP-217ENST00000548570 SPZ1Q9BXG8 430 aa5.82□□□□□ -1.48
APP-217ENST00000548570 SLC38A10Q9HBR0 1119 aa5.82□□□□□ -1.48
APP-217ENST00000548570 VAT1LQ9HCJ6 419 aa5.82□□□□□ -1.48
APP-217ENST00000548570 TMOD4Q9NZQ9 345 aa5.82□□□□□ -1.48
APP-217ENST00000548570 DOCK1Q14185 1865 aa5.81□□□□□ -1.48
APP-217ENST00000548570 THSD7BQ9C0I4 1608 aa5.81□□□□□ -1.48
APP-217ENST00000548570 PHIPQ8WWQ0 1821 aa5.81□□□□□ -1.48
APP-217ENST00000548570 MYPNQ86TC9 1320 aa5.81□□□□□ -1.48
APP-217ENST00000548570 PTPDC1A2A3K4 754 aa5.81□□□□□ -1.48
APP-217ENST00000548570 K7ELQ4 463 aaPredicted RBP5.81□□□□□ -1.48
APP-217ENST00000548570 ATP2A1O14983 1001 aa5.81□□□□□ -1.48
APP-217ENST00000548570 ZBTB5O15062 677 aa5.81□□□□□ -1.48
APP-217ENST00000548570 PRPF3O43395 683 aaKnown RBP5.81□□□□□ -1.48
APP-217ENST00000548570 EDIL3O43854 480 aa5.81□□□□□ -1.48
APP-217ENST00000548570 FLOT1O75955 427 aa5.81□□□□□ -1.48
APP-217ENST00000548570 FMNL1O95466 1100 aaPredicted RBP5.81□□□□□ -1.48
APP-217ENST00000548570 CALM1P0DP23 149 aa5.81□□□□□ -1.48
APP-217ENST00000548570 CALM2P0DP24 149 aa5.81□□□□□ -1.48
APP-217ENST00000548570 CALM3P0DP25 149 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms