RNA–Protein interactions for RNA: ENST00000548431.1

CALCOCO1-211, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-211ENST00000548431 PFASO15067 1338 aa8.2□□□□□ -1.1
CALCOCO1-211ENST00000548431 COL11A1P12107 1806 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 CCDC194A0A1B0GVG4 234 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 SPDYE3A6NKU9 549 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 FAM155AB1AL88 458 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 B4DLN1 442 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 BTBD19C9JJ37 291 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 F13A1P00488 732 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 U2AF2P26368 475 aaKnown RBP eCLIP8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 STAT3P40763 770 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 TM4SF4P48230 202 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 TRAPPC10P48553 1259 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 GHRHRQ02643 423 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 ORC2Q13416 577 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 USH1GQ495M9 461 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 RILPL1Q5EBL4 403 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 SNRNP48Q6IEG0 339 aaKnown RBP8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 GPAT2Q6NUI2 795 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 CCDC174Q6PII3 467 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 SAMD1Q6SPF0 538 aaPredicted RBP8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 KRT25Q7Z3Z0 450 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 IFNL1Q8IU54 200 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 NOSTRINQ8IVI9 506 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 CCAR1Q8IX12 1150 aaKnown RBP8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 DIS3L2Q8IYB7 885 aaKnown RBP8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 BLIDQ8IZY5 108 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 SHCBP1Q8NEM2 672 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 GPRC5AQ8NFJ5 357 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 GPKOWQ92917 476 aaPredicted RBP eCLIP8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 ATG4CQ96DT6 458 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 CAPNS2Q96L46 248 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 CPVLQ9H3G5 476 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 ACAD9Q9H845 621 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 ZFYVE28Q9HCC9 887 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 VPS54Q9P1Q0 977 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 CFAP45Q9UL16 551 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 CEP131Q9UPN4 1083 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 MTMR6Q9Y217 621 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 ZSWIM8A7E2V4 1837 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 MYH15Q9Y2K3 1946 aa8.19□□□□□ -1.1
CALCOCO1-211ENST00000548431 LOC102724159A0A0B4J2E5 919 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 hCG_1642624A0A1W2PR95 340 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 GOLGA6L22H0YM25 854 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 GCOM1H8Y6P7 765 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 BMP15O95972 392 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 POLR2MP0CAP2 368 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 ALAS1P13196 640 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 PTMSP20962 102 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 KIF23Q02241 960 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 PLS1Q14651 629 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 PWP2Q15269 919 aaKnown RBP8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 FAM110CQ1W6H9 321 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 SLC35G1Q2M3R5 365 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 RIOX2Q8IUF8 465 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 CPXCR1Q8N123 301 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 ZNF396Q96N95 335 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 P2RX7Q99572 595 aaKnown RBP8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 SPATC1LQ9H0A9 340 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 MORF4L1Q9UBU8 362 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 ZNF214Q9UL59 606 aaPredicted RBP8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 ZNF536O15090 1300 aa8.18□□□□□ -1.1
CALCOCO1-211ENST00000548431 STRNO43815 780 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 PPP1R11O60927 126 aaPredicted RBP8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 PPFIA3O75145 1194 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 MAPK4P31152 587 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 ERVK-9P63128 1117 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 ERVK-24P63145 666 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 KRT85P78386 507 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 DGKZQ13574 1117 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 KCTD2Q14681 263 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 TMEM132BQ14DG7 1078 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 NONOQ15233 471 aaKnown RBP eCLIP8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 RNF207Q6ZRF8 634 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 FAM43AQ8N2R8 423 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 REPS2Q8NFH8 660 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 COA7Q96BR5 231 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 AIFM3Q96NN9 605 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 SCAND2PQ9GZW5 306 aaPredicted RBP8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 RAVER2Q9HCJ3 691 aaKnown RBP8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 RNF146Q9NTX7 359 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 SLC5A4Q9NY91 659 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 ADD3Q9UEY8 706 aaKnown RBP8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 KCNJ14Q9UNX9 436 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 IVNS1ABPQ9Y6Y0 642 aa8.17□□□□□ -1.1
CALCOCO1-211ENST00000548431 BTBD18B2RXH4 712 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 LAD1O00515 517 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 CA12O43570 354 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 TLR2O60603 784 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 CFBP00751 764 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 CYP2C8P10632 490 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 GCFC2P16383 781 aaKnown RBP8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 HSPA6P17066 643 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 HSD17B4P51659 736 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 USP11P51784 963 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 GUCY1B3Q02153 619 aa8.16□□□□□ -1.1
CALCOCO1-211ENST00000548431 ARHGEF6Q15052 776 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms