RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, human

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCD1-204	ENST00000547637	ADD3	Q9UEY8	706 aa	Known RBP	27.24	■■□□□ 1.95
SMARCD1-204	ENST00000547637	PNMA2	Q9UL42	364 aa		27.24	■■□□□ 1.95
SMARCD1-204	ENST00000547637		Q9Y3F1	56 aa		27.24	■■□□□ 1.95
SMARCD1-204	ENST00000547637	SOWAHB	A6NEL2	793 aa		27.23	■■□□□ 1.95
SMARCD1-204	ENST00000547637	PSRC1	Q6PGN9	363 aa	Predicted RBP	27.23	■■□□□ 1.95
SMARCD1-204	ENST00000547637	FAM126B	Q8IXS8	530 aa		27.23	■■□□□ 1.95
SMARCD1-204	ENST00000547637	COL25A1	Q9BXS0	654 aa	Predicted RBP	27.23	■■□□□ 1.95
SMARCD1-204	ENST00000547637	CUL9	Q8IWT3	2517 aa		27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	DYNC1LI2	O43237	492 aa	Predicted RBP	27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	NMT2	O60551	498 aa		27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	ICAM1	P05362	532 aa		27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	DNAJB2	P25686	324 aa		27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	IRX5	P78411	483 aa	Predicted RBP	27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	BEX3	Q00994	111 aa		27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	FSCN1	Q16658	493 aa	Known RBP	27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	MCMDC2	Q4G0Z9	681 aa		27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	27.22	■■□□□ 1.95	4e-6	■■■□□ 18.8
SMARCD1-204	ENST00000547637	VTA1	Q9NP79	307 aa		27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	GNE	Q9Y223	722 aa	Known RBP	27.22	■■□□□ 1.95
SMARCD1-204	ENST00000547637	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.21	■■□□□ 1.95
SMARCD1-204	ENST00000547637	TOP1	P11387	765 aa	Known RBP	27.21	■■□□□ 1.95
SMARCD1-204	ENST00000547637	RRP12	Q5JTH9	1297 aa	Known RBP	27.21	■■□□□ 1.95
SMARCD1-204	ENST00000547637	CXCL17	Q6UXB2	119 aa		27.21	■■□□□ 1.95
SMARCD1-204	ENST00000547637	TIFA	Q96CG3	184 aa		27.21	■■□□□ 1.95
SMARCD1-204	ENST00000547637	MPHOSPH6	Q99547	160 aa	Known RBP	27.21	■■□□□ 1.95
SMARCD1-204	ENST00000547637	PPP1R12C	Q9BZL4	782 aa		27.21	■■□□□ 1.95
SMARCD1-204	ENST00000547637	INCENP	Q9NQS7	918 aa		27.21	■■□□□ 1.95
SMARCD1-204	ENST00000547637	LOC102724159	A0A0B4J2E5	919 aa		27.2	■■□□□ 1.94
SMARCD1-204	ENST00000547637	CSF2RA	P15509	400 aa		27.2	■■□□□ 1.94
SMARCD1-204	ENST00000547637	SNAP25	P60880	206 aa		27.2	■■□□□ 1.94
SMARCD1-204	ENST00000547637	ITGA7	Q13683	1181 aa		27.2	■■□□□ 1.94
SMARCD1-204	ENST00000547637	PWP2	Q15269	919 aa	Known RBP	27.2	■■□□□ 1.94
SMARCD1-204	ENST00000547637	MUM1L1	Q5H9M0	696 aa		27.2	■■□□□ 1.94
SMARCD1-204	ENST00000547637	KIAA1211	Q6ZU35	1233 aa		27.2	■■□□□ 1.94
SMARCD1-204	ENST00000547637		A0A0C4DFX4	3053 aa		27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	FGR	P09769	529 aa		27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	NOV	P48745	357 aa		27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	PDE1A	P54750	535 aa		27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	RRP1	P56182	461 aa	Known RBP	27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	TMEM240	Q5SV17	173 aa		27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	VPS53	Q5VIR6	699 aa		27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	EEPD1	Q7L9B9	569 aa		27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	ZNF576	Q9H609	170 aa		27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	TCP11L1	Q9NUJ3	509 aa		27.19	■■□□□ 1.94
SMARCD1-204	ENST00000547637	SALL3	Q9BXA9	1300 aa		27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	CTAGE5	O15320	804 aa		27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	CD4	P01730	458 aa		27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	FGA	P02671	866 aa		27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	PC	P11498	1178 aa	Known RBP	27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	SMPD1	P17405	629 aa		27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	MFAP1	P55081	439 aa	Known RBP	27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	SYDE2	Q5VT97	1194 aa		27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	BTNL9	Q6UXG8	535 aa		27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	RANBP17	Q9H2T7	1088 aa	Known RBP	27.18	■■□□□ 1.94
SMARCD1-204	ENST00000547637	FOXP2	O15409	715 aa		27.17	■■□□□ 1.94
SMARCD1-204	ENST00000547637	BRDT	Q58F21	947 aa	Predicted RBP	27.17	■■□□□ 1.94
SMARCD1-204	ENST00000547637	ZNF365	Q70YC5	407 aa		27.17	■■□□□ 1.94
SMARCD1-204	ENST00000547637	FBXO16	Q8IX29	292 aa	Predicted RBP	27.17	■■□□□ 1.94
SMARCD1-204	ENST00000547637	SYMPK	Q92797	1274 aa	Known RBP	27.17	■■□□□ 1.94
SMARCD1-204	ENST00000547637	TTC14	Q96N46	770 aa		27.17	■■□□□ 1.94
SMARCD1-204	ENST00000547637	HIPK3	Q9H422	1215 aa		27.17	■■□□□ 1.94
SMARCD1-204	ENST00000547637	IL23A	Q9NPF7	189 aa		27.17	■■□□□ 1.94
SMARCD1-204	ENST00000547637	PTPDC1	A2A3K4	754 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	TRIM6-TRIM34	B2RNG4	842 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637		B4DLN1	442 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	MRPL12	P52815	198 aa	Known RBP	27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	HDAC1	Q13547	482 aa	Predicted RBP	27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	BAAT	Q14032	418 aa	Predicted RBP	27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	TAPT1	Q6NXT6	567 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	MFSD6	Q6ZSS7	791 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	SLC43A3	Q8NBI5	491 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	GAS2L1	Q99501	681 aa	Predicted RBP	27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	TMEM47	Q9BQJ4	181 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	PDGFC	Q9NRA1	345 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	MSRA	Q9UJ68	235 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	ASTN1	O14525	1302 aa		27.16	■■□□□ 1.94
SMARCD1-204	ENST00000547637	FGB	P02675	491 aa		27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	ACR	P10323	421 aa		27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	HSPD1	P10809	573 aa	Known RBP	27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	CYP2C18	P33260	490 aa		27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	SLC16A2	P36021	539 aa		27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	GRIN2C	Q14957	1233 aa		27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	RPUSD2	Q8IZ73	545 aa	Known RBP	27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	MORC4	Q8TE76	937 aa		27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	RNF41	Q9H4P4	317 aa	Predicted RBP	27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	GPCPD1	Q9NPB8	672 aa		27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	GPHN	Q9NQX3	736 aa	Predicted RBP	27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	POLR3E	Q9NVU0	708 aa		27.15	■■□□□ 1.94
SMARCD1-204	ENST00000547637	LAMA2	P24043	3122 aa	Known RBP	27.14	■■□□□ 1.94
SMARCD1-204	ENST00000547637	SUPT20HL2	P0C7V6	817 aa		27.14	■■□□□ 1.94
SMARCD1-204	ENST00000547637	ALDH5A1	P51649	535 aa	Predicted RBP	27.14	■■□□□ 1.94
SMARCD1-204	ENST00000547637	AAMP	Q13685	434 aa		27.14	■■□□□ 1.94
SMARCD1-204	ENST00000547637	RAB30	Q15771	203 aa		27.14	■■□□□ 1.94
SMARCD1-204	ENST00000547637	DUSP28	Q4G0W2	176 aa		27.14	■■□□□ 1.94
SMARCD1-204	ENST00000547637	TTBK2	Q6IQ55	1244 aa		27.14	■■□□□ 1.94
SMARCD1-204	ENST00000547637	C16orf59	Q7L2K0	433 aa		27.14	■■□□□ 1.94
SMARCD1-204	ENST00000547637	FAM227B	Q96M60	508 aa		27.14	■■□□□ 1.94
SMARCD1-204	ENST00000547637	ZMYM6	O95789	1325 aa		27.14	■■□□□ 1.93
SMARCD1-204	ENST00000547637	FRMPD2	Q68DX3	1309 aa	Predicted RBP	27.14	■■□□□ 1.93
SMARCD1-204	ENST00000547637	CPT1A	P50416	773 aa		27.13	■■□□□ 1.93

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms