RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 NEDD4P46934 1319 aa15.72■□□□□ 0.11
CPSF6-204ENST00000547486 COL6A3P12111 3177 aa15.72■□□□□ 0.11
CPSF6-204ENST00000547486 MOXD2PA6NHM9 499 aa15.72■□□□□ 0.11
CPSF6-204ENST00000547486 PQBP1O60828 265 aaKnown RBP15.72■□□□□ 0.11
CPSF6-204ENST00000547486 C6orf222P0C671 652 aaPredicted RBP15.72■□□□□ 0.11
CPSF6-204ENST00000547486 PCP11498 1178 aaKnown RBP15.72■□□□□ 0.11
CPSF6-204ENST00000547486 PDE4AP27815 886 aa15.72■□□□□ 0.11
CPSF6-204ENST00000547486 MFAP1P55081 439 aaKnown RBP15.72■□□□□ 0.11
CPSF6-204ENST00000547486 GJA9P57773 515 aa15.72■□□□□ 0.11
CPSF6-204ENST00000547486 FAAP100Q0VG06 881 aa15.72■□□□□ 0.11
CPSF6-204ENST00000547486 TMEM63BQ5T3F8 832 aa15.72■□□□□ 0.11
CPSF6-204ENST00000547486 UPF3AQ9H1J1 476 aaKnown RBP15.72■□□□□ 0.11
CPSF6-204ENST00000547486 IL25Q9H293 177 aa15.72■□□□□ 0.11
CPSF6-204ENST00000547486 STARD7Q9NQZ5 370 aa15.72■□□□□ 0.11
CPSF6-204ENST00000547486 ASB14A6NK59 587 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 ASGR1P07306 291 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 CLTBP09497 229 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 SNHG28P0DPA3 235 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 CST5P28325 142 aaPredicted RBP15.71■□□□□ 0.11
CPSF6-204ENST00000547486 EPHB4P54760 987 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 ZNF543Q08ER8 600 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 BAATQ14032 418 aaPredicted RBP15.71■□□□□ 0.11
CPSF6-204ENST00000547486 GNASQ5JWF2 1037 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 NSMFQ6X4W1 530 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 ANKRD33Q7Z3H0 272 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 NUP133Q8WUM0 1156 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 CLEC4DQ8WXI8 215 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 PDGFCQ9NRA1 345 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 DIAPH3Q9NSV4 1193 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 MTMR10Q9NXD2 777 aa15.71■□□□□ 0.11
CPSF6-204ENST00000547486 NFIBO00712 420 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 KIAA0355O15063 1070 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 GOLGA8HP0CJ92 632 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 CDK7P50613 346 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 NKX3-2P78367 333 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 BEX3Q00994 111 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 TNFAIP2Q03169 654 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 TAPT1Q6NXT6 567 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 EEPD1Q7L9B9 569 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 ESR2Q92731 530 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 TOX2Q96NM4 488 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 CPVLQ9H3G5 476 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 RNF41Q9H4P4 317 aaPredicted RBP15.7■□□□□ 0.1
CPSF6-204ENST00000547486 TMEM39AQ9NV64 488 aa15.7■□□□□ 0.1
CPSF6-204ENST00000547486 GNEQ9Y223 722 aaKnown RBP15.7■□□□□ 0.1
CPSF6-204ENST00000547486 KDM4AO75164 1064 aa15.69■□□□□ 0.1
CPSF6-204ENST00000547486 SMPD1P17405 629 aa15.69■□□□□ 0.1
CPSF6-204ENST00000547486 DGKHQ86XP1 1220 aa15.69■□□□□ 0.1
CPSF6-204ENST00000547486 PCSK9Q8NBP7 692 aaKnown RBP15.69■□□□□ 0.1
CPSF6-204ENST00000547486 MORC4Q8TE76 937 aa15.69■□□□□ 0.1
CPSF6-204ENST00000547486 SPC25Q9HBM1 224 aa15.69■□□□□ 0.1
CPSF6-204ENST00000547486 ZSWIM5Q9P217 1185 aa15.69■□□□□ 0.1
CPSF6-204ENST00000547486 ELP1O95163 1332 aa15.68■□□□□ 0.1
CPSF6-204ENST00000547486 B4E1Z4 1266 aa15.68■□□□□ 0.1
CPSF6-204ENST00000547486 HIP1O00291 1037 aa15.68■□□□□ 0.1
CPSF6-204ENST00000547486 DYNC1LI2O43237 492 aaPredicted RBP15.68■□□□□ 0.1
CPSF6-204ENST00000547486 GSPT1P15170 499 aaKnown RBP15.68■□□□□ 0.1
CPSF6-204ENST00000547486 RAG1P15918 1043 aa15.68■□□□□ 0.1
CPSF6-204ENST00000547486 IRX6P78412 446 aaPredicted RBP15.68■□□□□ 0.1
CPSF6-204ENST00000547486 NOL8Q76FK4 1167 aaKnown RBP15.68■□□□□ 0.1
CPSF6-204ENST00000547486 FBXO16Q8IX29 292 aaPredicted RBP15.68■□□□□ 0.1
CPSF6-204ENST00000547486 ANKS1AQ92625 1134 aa15.68■□□□□ 0.1
CPSF6-204ENST00000547486 VTI1AQ96AJ9 217 aa15.68■□□□□ 0.1
CPSF6-204ENST00000547486 GLT1D1Q96MS3 346 aa15.68■□□□□ 0.1
CPSF6-204ENST00000547486 DSCC1Q9BVC3 393 aa15.68■□□□□ 0.1
CPSF6-204ENST00000547486 UBA5Q9GZZ9 404 aa15.68■□□□□ 0.1
CPSF6-204ENST00000547486 LTBP2Q14767 1821 aa15.67■□□□□ 0.1
CPSF6-204ENST00000547486 DCDC2CA8MYV0 355 aa15.67■□□□□ 0.1
CPSF6-204ENST00000547486 IQSEC1Q6DN90 963 aa15.67■□□□□ 0.1
CPSF6-204ENST00000547486 SLC30A10Q6XR72 485 aa15.67■□□□□ 0.1
CPSF6-204ENST00000547486 MCM3APO60318 1980 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 PTPDC1A2A3K4 754 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 ARVCFO00192 962 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 CALML3P27482 149 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 ALDH5A1P51649 535 aaPredicted RBP15.66■□□□□ 0.1
CPSF6-204ENST00000547486 TTC22Q5TAA0 569 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 FAM109BQ6ICB4 259 aaPredicted RBP15.66■□□□□ 0.1
CPSF6-204ENST00000547486 CXCL17Q6UXB2 119 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 TLK2Q86UE8 772 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 ENAHQ8N8S7 591 aaPredicted RBP15.66■□□□□ 0.1
CPSF6-204ENST00000547486 PNMA1Q8ND90 353 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 ZSCAN10Q96SZ4 725 aaPredicted RBP15.66■□□□□ 0.1
CPSF6-204ENST00000547486 TBX21Q9UL17 535 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 GRIN2DO15399 1336 aa15.66■□□□□ 0.1
CPSF6-204ENST00000547486 A0A0U1RQG5 324 aaPredicted RBP15.65■□□□□ 0.1
CPSF6-204ENST00000547486 TIMP1P01033 207 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 RPS6P62753 249 aaKnown RBP15.65■□□□□ 0.1
CPSF6-204ENST00000547486 FSCN1Q16658 493 aaKnown RBP15.65■□□□□ 0.1
CPSF6-204ENST00000547486 IMMTQ16891 758 aaKnown RBP15.65■□□□□ 0.1
CPSF6-204ENST00000547486 GPATCH4Q5T3I0 446 aaKnown RBP15.65■□□□□ 0.1
CPSF6-204ENST00000547486 RNF207Q6ZRF8 634 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 KIAA1211Q6ZU35 1233 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 IQCA1Q86XH1 822 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 FAM126BQ8IXS8 530 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 FAM161BQ96MY7 647 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 GUCD1Q96NT3 240 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 AP5M1Q9H0R1 490 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 VTA1Q9NP79 307 aa15.65■□□□□ 0.1
CPSF6-204ENST00000547486 ADD3Q9UEY8 706 aaKnown RBP15.65■□□□□ 0.1
CPSF6-204ENST00000547486 CTNNA3Q9UI47 895 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms