RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 DIAPH3Q9NSV4 1193 aa16.93■□□□□ 0.3
COL2A1-209ENST00000546974 CYP39A1Q9NYL5 469 aa16.93■□□□□ 0.3
COL2A1-209ENST00000546974 LCTP09848 1927 aa16.92■□□□□ 0.3
COL2A1-209ENST00000546974 MYADML2A6NDP7 307 aa16.92■□□□□ 0.3
COL2A1-209ENST00000546974 C6orf222P0C671 652 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-209ENST00000546974 PDHBP11177 359 aa16.92■□□□□ 0.3
COL2A1-209ENST00000546974 NKX3-2P78367 333 aa16.92■□□□□ 0.3
COL2A1-209ENST00000546974 ANKRD33Q7Z3H0 272 aa16.92■□□□□ 0.3
COL2A1-209ENST00000546974 DEFB123Q8N688 67 aa16.92■□□□□ 0.3
COL2A1-209ENST00000546974 BADQ92934 168 aa16.92■□□□□ 0.3
COL2A1-209ENST00000546974 GPCPD1Q9NPB8 672 aa16.92■□□□□ 0.3
COL2A1-209ENST00000546974 ELP1O95163 1332 aa16.92■□□□□ 0.3
COL2A1-209ENST00000546974 FRMPD2Q68DX3 1309 aaPredicted RBP16.92■□□□□ 0.3
COL2A1-209ENST00000546974 KIAA0355O15063 1070 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 PQBP1O60828 265 aaKnown RBP16.91■□□□□ 0.3
COL2A1-209ENST00000546974 SNHG28P0DPA3 235 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 CCDC178Q5BJE1 867 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 NSMFQ6X4W1 530 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 DGKHQ86XP1 1220 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 GLT1D1Q96MS3 346 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 DSCC1Q9BVC3 393 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 PNMA2Q9UL42 364 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 SUPT16HQ9Y5B9 1047 aaKnown RBP16.91■□□□□ 0.3
COL2A1-209ENST00000546974 ASTN1O14525 1302 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 NEDD4P46934 1319 aa16.91■□□□□ 0.3
COL2A1-209ENST00000546974 DCDC2CA8MYV0 355 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 ASGR1P07306 291 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 IRX5P78411 483 aaPredicted RBP16.9■□□□□ 0.3
COL2A1-209ENST00000546974 TNFAIP2Q03169 654 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 ZNF543Q08ER8 600 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 FAAP100Q0VG06 881 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 GNASQ5JWF2 1037 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 Q7L0L9 218 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 TMEM39AQ9NV64 488 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 MROH7Q68CQ1 1323 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 LRRC37A2A6NM11 1700 aa16.9■□□□□ 0.3
COL2A1-209ENST00000546974 LOC102724159A0A0B4J2E5 919 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.89■□□□□ 0.29
COL2A1-209ENST00000546974 RAG1P15918 1043 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 ITGB8P26012 769 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 CDK7P50613 346 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 PWP2Q15269 919 aaKnown RBP16.89■□□□□ 0.29
COL2A1-209ENST00000546974 SHHQ15465 462 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 GPATCH4Q5T3I0 446 aaKnown RBP16.89■□□□□ 0.29
COL2A1-209ENST00000546974 IQSEC1Q6DN90 963 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 IQCA1Q86XH1 822 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 MORC4Q8TE76 937 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 CTNNA3Q9UI47 895 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 GNEQ9Y223 722 aaKnown RBP16.89■□□□□ 0.29
COL2A1-209ENST00000546974 A0A0C4DFX4 3053 aa16.89■□□□□ 0.29
COL2A1-209ENST00000546974 CTAGE5O15320 804 aa16.88■□□□□ 0.29
COL2A1-209ENST00000546974 BAATQ14032 418 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-209ENST00000546974 IMMTQ16891 758 aaKnown RBP16.88■□□□□ 0.29
COL2A1-209ENST00000546974 FAM109BQ6ICB4 259 aaPredicted RBP16.88■□□□□ 0.29
COL2A1-209ENST00000546974 TAPT1Q6NXT6 567 aa16.88■□□□□ 0.29
COL2A1-209ENST00000546974 ANKS1AQ92625 1134 aa16.88■□□□□ 0.29
COL2A1-209ENST00000546974 VTI1AQ96AJ9 217 aa16.88■□□□□ 0.29
COL2A1-209ENST00000546974 ZKSCAN3Q9BRR0 538 aa16.88■□□□□ 0.29
COL2A1-209ENST00000546974 VTA1Q9NP79 307 aa16.88■□□□□ 0.29
COL2A1-209ENST00000546974 MTMR10Q9NXD2 777 aa16.88■□□□□ 0.29
COL2A1-209ENST00000546974 ADD3Q9UEY8 706 aaKnown RBP16.88■□□□□ 0.29
COL2A1-209ENST00000546974 Q9Y3F1 56 aa16.88■□□□□ 0.29
COL2A1-209ENST00000546974 WDR19Q8NEZ3 1342 aa16.88■□□□□ 0.29
COL2A1-209ENST00000546974 A0A0U1RQG5 324 aaPredicted RBP16.87■□□□□ 0.29
COL2A1-209ENST00000546974 ARVCFO00192 962 aa16.87■□□□□ 0.29
COL2A1-209ENST00000546974 NFIBO00712 420 aa16.87■□□□□ 0.29
COL2A1-209ENST00000546974 KDM4AO75164 1064 aa16.87■□□□□ 0.29
COL2A1-209ENST00000546974 C9orf50Q5SZB4 431 aa16.87■□□□□ 0.29
COL2A1-209ENST00000546974 NOL8Q76FK4 1167 aaKnown RBP16.87■□□□□ 0.29
COL2A1-209ENST00000546974 TLK2Q86UE8 772 aa16.87■□□□□ 0.29
COL2A1-209ENST00000546974 CLEC4DQ8WXI8 215 aa16.87■□□□□ 0.29
COL2A1-209ENST00000546974 PURBQ96QR8 312 aaKnown RBP16.87■□□□□ 0.29
COL2A1-209ENST00000546974 PTPDC1A2A3K4 754 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 B4E1Z4 1266 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 SMPD1P17405 629 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 PDE4AP27815 886 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 ALDH5A1P51649 535 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-209ENST00000546974 BEX3Q00994 111 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 EEPD1Q7L9B9 569 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 FBXO16Q8IX29 292 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-209ENST00000546974 PNMA1Q8ND90 353 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 ZSCAN10Q96SZ4 725 aaPredicted RBP16.86■□□□□ 0.29
COL2A1-209ENST00000546974 AP5M1Q9H0R1 490 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 PDGFCQ9NRA1 345 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 ZSWIM5Q9P217 1185 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 TBX21Q9UL17 535 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 STXBP5LQ9Y2K9 1186 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
COL2A1-209ENST00000546974 MYH6P13533 1939 aa16.86■□□□□ 0.29
COL2A1-209ENST00000546974 DYNC1LI2O43237 492 aaPredicted RBP16.85■□□□□ 0.29
COL2A1-209ENST00000546974 ZEB2O60315 1214 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 CABYRO75952 493 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 TIMP1P01033 207 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 FPGSQ05932 587 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 FSCN1Q16658 493 aaKnown RBP16.85■□□□□ 0.29
COL2A1-209ENST00000546974 TTC22Q5TAA0 569 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 RNF207Q6ZRF8 634 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 KRT23Q9C075 422 aa16.85■□□□□ 0.29
COL2A1-209ENST00000546974 MAF1Q9H063 256 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms