RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 PCDHA4Q9UN74 947 aa8.02□□□□□ -1.13
HMGCS2-204ENST00000544913 VWA5AO00534 786 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 MEIS2O14770 477 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 FIBPO43427 364 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 PEX10O60683 326 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 GADD45BO75293 160 aaPredicted RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 MSNP26038 577 aaKnown RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 HOXA7P31268 230 aaPredicted RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 KRT2P35908 639 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 NAPAP54920 295 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 GHRHRQ02643 423 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 TTLL12Q14166 644 aaPredicted RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 BLIDQ8IZY5 108 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 PRPF38AQ8NAV1 312 aaKnown RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 CHURC1Q8WUH1 139 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 CRYGNQ8WXF5 182 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 CLEC4DQ8WXI8 215 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 TANGO6Q9C0B7 1094 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 RIC8AQ9NPQ8 531 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 DDX19AQ9NUU7 478 aaKnown RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 TMEM260Q9NX78 707 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 RTEL1Q9NZ71 1219 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 CCDC39Q9UFE4 941 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 SEC63Q9UGP8 760 aaKnown RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 ZNF214Q9UL59 606 aaPredicted RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 PCDHA1Q9Y5I3 950 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 CLIC4Q9Y696 253 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 SMCO2A6NFE2 343 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 FLOT1O75955 427 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 ICAM1P05362 532 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 CCDC192P0DO97 292 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 CALML3P27482 149 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 DSG3P32926 999 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 NLRP5P59047 1200 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 TRIM29Q14134 588 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 GALNT17Q6IS24 598 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 SAPCD2Q86UD0 394 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 PROCA1Q8NCQ7 364 aaPredicted RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 CCDC148Q8NFR7 591 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 LEO1Q8WVC0 666 aaPredicted RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 BRI3BPQ8WY22 251 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 TBC1D5Q92609 795 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 PGBD1Q96JS3 809 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 SPATA32Q96LK8 384 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 AGBL1Q96MI9 1066 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 ZNF396Q96N95 335 aaPredicted RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 AMNQ9BXJ7 453 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 R3HDMLQ9H3Y0 253 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 GPBP1L1Q9HC44 474 aaPredicted RBP8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 POLR3EQ9NVU0 708 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 RCOR1Q9UKL0 485 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 RIPK3Q9Y572 518 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 PCDHB6Q9Y5E3 794 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 LCTP09848 1927 aa8.01□□□□□ -1.13
HMGCS2-204ENST00000544913 CNMDO75829 334 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 ADCY7P51828 1080 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 UBE2SQ16763 222 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 SPRYD7Q5W111 196 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 CCDC174Q6PII3 467 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 LBX2Q6XYB7 198 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 FBXO11Q86XK2 927 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 LINC00301Q8NCQ3 95 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 NOL7Q9UMY1 257 aaKnown RBP8□□□□□ -1.13
HMGCS2-204ENST00000544913 AGTPBP1Q9UPW5 1226 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 MRVI1Q9Y6F6 885 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 MYPNQ86TC9 1320 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 RBBP6Q7Z6E9 1792 aaKnown RBP8□□□□□ -1.13
HMGCS2-204ENST00000544913 MYH7BA7E2Y1 1941 aa8□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L15C9J2P7 530 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L13C9JLJ4 530 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L11C9JVI0 530 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L18D6R9N7 530 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L22D6RA61 530 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L17D6RBQ6 530 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L19D6RCP7 530 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L20D6RJB6 530 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 PIK3CDO00329 1044 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 NFIBO00712 420 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 ATP2A1O14983 1001 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 CTAGE5O15320 804 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 TPM3P06753 285 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 XBP1P17861 261 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L24Q0WX57 530 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 IKQ13123 557 aaPredicted RBP7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 TMEM132BQ14DG7 1078 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USH1GQ495M9 461 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 MUM1L1Q5H9M0 696 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 AXDND1Q5T1B0 1012 aaPredicted RBP7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 ANO1Q5XXA6 986 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 USP17L6PQ6QN14 398 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 PIK3AP1Q6ZUJ8 805 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 RASAL3Q86YV0 1011 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 REXO1Q8N1G1 1221 aaKnown RBP7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 C4orf32Q8N8J7 132 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 SLC10A4Q96EP9 437 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 PTPN18Q99952 460 aa7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 RAVER2Q9HCJ3 691 aaKnown RBP7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 RRAGDQ9NQL2 400 aaPredicted RBP7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.99□□□□□ -1.13
HMGCS2-204ENST00000544913 MORC2Q9Y6X9 1032 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms