RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 TTF2Q9UNY4 1162 aaKnown RBP20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 CTNND2Q9UQB3 1225 aa20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 USP17L5A8MUK1 530 aa20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 TPM1P09493 284 aa20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 AMPD3Q01432 767 aa20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 HOMER1Q86YM7 354 aa20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 IGSF22Q8N9C0 903 aa20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 GIMAP8Q8ND71 665 aaPredicted RBP20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 NELFBQ8WX92 580 aa20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 PIGSQ96S52 555 aa20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 GLT8D2Q9H1C3 349 aa20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 BAZ2BQ9UIF8 2168 aaKnown RBP20.32■□□□□ 0.84
TNFAIP1-202ENST00000544907 ARFGEF1Q9Y6D6 1849 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 EEF1GP26641 437 aaKnown RBP20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 ZNF543Q08ER8 600 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 TCP11X2Q5H9J9 407 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 SYT10Q6XYQ8 523 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 CABP7Q86V35 215 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 DHTKD1Q96HY7 919 aaPredicted RBP20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 ZDHHC15Q96MV8 337 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 C7orf25Q9BPX7 421 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 DHX36Q9H2U1 1008 aaKnown RBP20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 THAP9Q9H5L6 903 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 USP40Q9NVE5 1235 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 BCS1LQ9Y276 419 aa20.31■□□□□ 0.84
TNFAIP1-202ENST00000544907 PNMA6FA0A0J9YX94 578 aa20.3■□□□□ 0.84
TNFAIP1-202ENST00000544907 KLRC4O43908 158 aa20.3■□□□□ 0.84
TNFAIP1-202ENST00000544907 CCNT1O60563 726 aaKnown RBP20.3■□□□□ 0.84
TNFAIP1-202ENST00000544907 FXR2P51116 673 aaKnown RBP eCLIP20.3■□□□□ 0.84
TNFAIP1-202ENST00000544907 STX17P56962 302 aa20.3■□□□□ 0.84
TNFAIP1-202ENST00000544907 KRT31Q15323 416 aa20.3■□□□□ 0.84
TNFAIP1-202ENST00000544907 SMYD4Q8IYR2 804 aaPredicted RBP20.3■□□□□ 0.84
TNFAIP1-202ENST00000544907 GOLGB1Q14789 3259 aaKnown RBP20.3■□□□□ 0.84
TNFAIP1-202ENST00000544907 GREB1LQ9C091 1923 aaPredicted RBP20.3■□□□□ 0.84
TNFAIP1-202ENST00000544907 PSMA7O14818 248 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 RIMBP2O15034 1052 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 MFAP3LO75121 409 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 AKR1B1P15121 316 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 PRCPP42785 496 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 ADCY7P51828 1080 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 PDIA5Q14554 519 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 HSP90AA4PQ58FG1 418 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 APOBEC3HQ6NTF7 200 aaKnown RBP20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 RASSF8Q8NHQ8 419 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 TBCKQ8TEA7 893 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 STAMQ92783 540 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 MTMR8Q96EF0 704 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 MTMR9Q96QG7 549 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 FEZ1Q99689 392 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 NAP1L4Q99733 375 aaKnown RBP20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 DDX4Q9NQI0 724 aaKnown RBP20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 STK17AQ9UEE5 414 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 ZNF215Q9UL58 517 aaPredicted RBP20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 TEX33O43247 280 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 SLC26A4O43511 780 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 SHMT1P34896 483 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 COPB1P53618 953 aaKnown RBP20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 ADKP55263 362 aaKnown RBP20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 LETM2Q2VYF4 491 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 PPP4R3AQ6IN85 833 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 CDC42EP5Q6NZY7 148 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 RAB34Q9BZG1 259 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 RIC8AQ9NPQ8 531 aa20.29■□□□□ 0.84
TNFAIP1-202ENST00000544907 A0A1W2PQC6 194 aa20.28■□□□□ 0.84
TNFAIP1-202ENST00000544907 KCNJ18B7U540 433 aa20.28■□□□□ 0.84
TNFAIP1-202ENST00000544907 PICALMQ13492 652 aa20.28■□□□□ 0.84
TNFAIP1-202ENST00000544907 KCNJ12Q14500 433 aa20.28■□□□□ 0.84
TNFAIP1-202ENST00000544907 KMT5BQ4FZB7 885 aa20.28■□□□□ 0.84
TNFAIP1-202ENST00000544907 STRIP1Q5VSL9 837 aa20.28■□□□□ 0.84
TNFAIP1-202ENST00000544907 CNNM4Q6P4Q7 775 aa20.28■□□□□ 0.84
TNFAIP1-202ENST00000544907 N4BP3O15049 544 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 CCDC175P0C221 793 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 RBL2Q08999 1139 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 FOXR2Q6PJQ5 311 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 MKL1Q969V6 931 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 CALML4Q96GE6 196 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 IDI2Q9BXS1 227 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 TRIM9Q9C026 710 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 LRRC27Q9C0I9 530 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 DNAI1Q9UI46 699 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 MTMR7Q9Y216 660 aa20.27■□□□□ 0.84
TNFAIP1-202ENST00000544907 BICDL2A1A5D9 508 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 GCFC2P16383 781 aaKnown RBP20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 PLCG1P19174 1290 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 CDC25AP30304 524 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 CLK2P49760 499 aaKnown RBP20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 TMEM266Q2M3C6 531 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 TMTC1Q8IUR5 882 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 G3V3G9 751 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 C21orf2O43822 256 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 CRKP46108 304 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 DCAF8Q5TAQ9 597 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 MCTP2Q6DN12 878 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 RASGRP2Q7LDG7 609 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 CPVLQ9H3G5 476 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 JMJD4Q9H9V9 463 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 GDAQ9Y2T3 454 aa20.26■□□□□ 0.83
TNFAIP1-202ENST00000544907 PVALEFA0A1B0GWK0 134 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms