RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 TMEM232C9JQI7 657 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 NMT2O60551 498 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 SLC25A27O95847 323 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 PARP1P09874 1014 aaKnown RBP11.08□□□□□ -0.64
CIT-216ENST00000544872 DSG3P32926 999 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 PBX2P40425 430 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 ID4P47928 161 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 GNAQP50148 359 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 PTPN5P54829 565 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 ASPRV1Q53RT3 343 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 CLEC10AQ8IUN9 316 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 TRIB2Q92519 343 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 ANKS1AQ92625 1134 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 JAKMIP1Q96N16 626 aaKnown RBP11.08□□□□□ -0.64
CIT-216ENST00000544872 USP26Q9BXU7 913 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 NAP1L2Q9ULW6 460 aaPredicted RBP11.08□□□□□ -0.64
CIT-216ENST00000544872 COG5Q9UP83 839 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 WDR19Q8NEZ3 1342 aa11.08□□□□□ -0.64
CIT-216ENST00000544872 CCDC196A0A1B0GTZ2 297 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 PLA2G6O60733 806 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 CYP2B6P20813 491 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 ANAPC15P60006 121 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 LBX2Q6XYB7 198 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 ENAHQ8N8S7 591 aaPredicted RBP11.07□□□□□ -0.64
CIT-216ENST00000544872 CHMP4CQ96CF2 233 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 LZTS2Q9BRK4 669 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 PBX4Q9BYU1 374 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 MROH8Q9H579 483 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 CD320Q9NPF0 282 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 MSRAQ9UJ68 235 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 PPP1R9AQ9ULJ8 1098 aa11.07□□□□□ -0.64
CIT-216ENST00000544872 ZFHX2Q9C0A1 2572 aaPredicted RBP11.07□□□□□ -0.64
CIT-216ENST00000544872 GRXCR1A8MXD5 290 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 STRNO43815 780 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 STAT3P40763 770 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 LIFRP42702 1097 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 NOVP48745 357 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 SLC4A3P48751 1232 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 OAZ1P54368 228 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 EPHB4P54760 987 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 ERVK-24P63145 666 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 PPP2R5BQ15173 497 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 ANKRD1Q15327 319 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 LHX8Q68G74 356 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 GJD3Q8N144 294 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 NUP133Q8WUM0 1156 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 MFSD14AQ96MC6 490 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 SLC28A3Q9HAS3 691 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 GPCPD1Q9NPB8 672 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 PDLIM7Q9NR12 457 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 MORF4L1Q9UBU8 362 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 FBXO40Q9UH90 709 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 LRRC37A2A6NM11 1700 aa11.06□□□□□ -0.64
CIT-216ENST00000544872 TRIM43BA6NCK2 446 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 VWA5AO00534 786 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 DDAH1O94760 285 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 PDHBP11177 359 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 CASTP20810 708 aaKnown RBP11.05□□□□□ -0.64
CIT-216ENST00000544872 CCND3P30281 292 aaPredicted RBP11.05□□□□□ -0.64
CIT-216ENST00000544872 FPGSQ05932 587 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 TKFCQ3LXA3 575 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 TRIM60Q495X7 471 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 SYDE2Q5VT97 1194 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
CIT-216ENST00000544872 KCTD1Q719H9 257 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 CYB5R4Q7L1T6 521 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 CHST3Q7LGC8 479 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 SH3RF1Q7Z6J0 888 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 PLEKHH3Q7Z736 793 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 NCAPG2Q86XI2 1143 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 MB21D2Q8IYB1 491 aaPredicted RBP11.05□□□□□ -0.64
CIT-216ENST00000544872 TRMT44Q8IYL2 757 aaKnown RBP11.05□□□□□ -0.64
CIT-216ENST00000544872 SOCS4Q8WXH5 440 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 TRIM43Q96BQ3 446 aaPredicted RBP11.05□□□□□ -0.64
CIT-216ENST00000544872 MAP3K14Q99558 947 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 NUP88Q99567 741 aaPredicted RBP11.05□□□□□ -0.64
CIT-216ENST00000544872 TEX13BQ9BXU2 312 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 TM6SF1Q9BZW5 370 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 SPATC1LQ9H0A9 340 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 SNX14Q9Y5W7 946 aa11.05□□□□□ -0.64
CIT-216ENST00000544872 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
CIT-216ENST00000544872 GTPBP6O43824 516 aaPredicted RBP11.04□□□□□ -0.64
CIT-216ENST00000544872 FCER1AP12319 257 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 AKAP17AQ02040 695 aaKnown RBP11.04□□□□□ -0.64
CIT-216ENST00000544872 CACNB2Q08289 660 aaPredicted RBP11.04□□□□□ -0.64
CIT-216ENST00000544872 ZNF543Q08ER8 600 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 MAP3K21Q5TCX8 1036 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 RUFY3Q7L099 469 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 DPP9Q86TI2 863 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 CPXCR1Q8N123 301 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 SHCBP1Q8NEM2 672 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 IGDCC4Q8TDY8 1250 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 KCNB2Q92953 911 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 HLA-CQ95604 372 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 ATG4CQ96DT6 458 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 DDX11Q96FC9 970 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 MPHOSPH6Q99547 160 aaKnown RBP11.04□□□□□ -0.64
CIT-216ENST00000544872 NUDT12Q9BQG2 462 aa11.04□□□□□ -0.64
CIT-216ENST00000544872 RBM28Q9NW13 759 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms