RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CCAR1Q8IX12 1150 aaKnown RBP34.73■■■■□ 3.15
CCM2-219ENST00000544363 SYAP1Q96A49 352 aaPredicted RBP34.73■■■■□ 3.15
CCM2-219ENST00000544363 FMR1Q06787 632 aaKnown RBP eCLIP34.72■■■■□ 3.158e-10■■■■■ 77.9
CCM2-219ENST00000544363 SLC38A10Q9HBR0 1119 aa34.72■■■■□ 3.15
CCM2-219ENST00000544363 FDX1P10109 184 aa34.71■■■■□ 3.15
CCM2-219ENST00000544363 TAL1P17542 331 aaPredicted RBP34.71■■■■□ 3.15
CCM2-219ENST00000544363 KRI1Q8N9T8 703 aaKnown RBP34.71■■■■□ 3.15
CCM2-219ENST00000544363 TBCKQ8TEA7 893 aa34.71■■■■□ 3.15
CCM2-219ENST00000544363 OTUD5Q96G74 571 aa34.71■■■■□ 3.15
CCM2-219ENST00000544363 ZNF408Q9H9D4 720 aa34.71■■■■□ 3.15
CCM2-219ENST00000544363 CUTAO60888 179 aa34.7■■■■□ 3.15
CCM2-219ENST00000544363 ICAM1P05362 532 aa34.7■■■■□ 3.15
CCM2-219ENST00000544363 TEX2Q8IWB9 1127 aa34.7■■■■□ 3.15
CCM2-219ENST00000544363 ZNF526Q8TF50 670 aaPredicted RBP34.7■■■■□ 3.15
CCM2-219ENST00000544363 ZNF536O15090 1300 aa34.7■■■■□ 3.15
CCM2-219ENST00000544363 UNCXA6NJT0 531 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L15C9J2P7 530 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L13C9JLJ4 530 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L11C9JVI0 530 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L18D6R9N7 530 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L22D6RA61 530 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L17D6RBQ6 530 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L19D6RCP7 530 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L20D6RJB6 530 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 MEIS2O14770 477 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 OPLAHO14841 1288 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 IRF6O14896 467 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 PTPREP23469 700 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 MCM7P33993 719 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L24Q0WX57 530 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 MCTP2Q6DN12 878 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 USP17L6PQ6QN14 398 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 CATSPERGQ6ZRH7 1159 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 NEK8Q86SG6 692 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 FSIP1Q8NA03 581 aa34.7■■■■□ 3.14
CCM2-219ENST00000544363 FBXO2Q9UK22 296 aaPredicted RBP34.7■■■■□ 3.14
CCM2-219ENST00000544363 MRPL11Q9Y3B7 192 aaKnown RBP34.7■■■■□ 3.14
CCM2-219ENST00000544363 PTPRFP10586 1907 aa34.69■■■■□ 3.14
CCM2-219ENST00000544363 ABCB11O95342 1321 aa34.69■■■■□ 3.14
CCM2-219ENST00000544363 CXCL11O14625 94 aa34.69■■■■□ 3.14
CCM2-219ENST00000544363 ATP2C1P98194 919 aaPredicted RBP34.69■■■■□ 3.14
CCM2-219ENST00000544363 PPIL2Q13356 520 aa34.69■■■■□ 3.14
CCM2-219ENST00000544363 MRPS27Q92552 414 aaKnown RBP34.69■■■■□ 3.14
CCM2-219ENST00000544363 SRPRBQ9Y5M8 271 aaKnown RBP34.69■■■■□ 3.14
CCM2-219ENST00000544363 PARP14Q460N5 1801 aa34.69■■■■□ 3.14
CCM2-219ENST00000544363 ZBED4O75132 1171 aa34.68■■■■□ 3.14
CCM2-219ENST00000544363 PTGDRQ13258 359 aa34.68■■■■□ 3.14
CCM2-219ENST00000544363 GOLPH3LQ9H4A5 285 aa34.68■■■■□ 3.14
CCM2-219ENST00000544363 CCPG1Q9ULG6 757 aa34.68■■■■□ 3.14
CCM2-219ENST00000544363 A0A0G2JLL6 359 aaPredicted RBP34.67■■■■□ 3.14
CCM2-219ENST00000544363 CMA1P23946 247 aa34.67■■■■□ 3.14
CCM2-219ENST00000544363 DSG3P32926 999 aa34.67■■■■□ 3.14
CCM2-219ENST00000544363 AP3B2Q13367 1082 aa34.67■■■■□ 3.14
CCM2-219ENST00000544363 COG2Q14746 738 aa34.67■■■■□ 3.14
CCM2-219ENST00000544363 CCDC73Q6ZRK6 1079 aa34.67■■■■□ 3.14
CCM2-219ENST00000544363 PRRT2Q7Z6L0 340 aaPredicted RBP34.67■■■■□ 3.14
CCM2-219ENST00000544363 CLIC6Q96NY7 704 aa34.67■■■■□ 3.14
CCM2-219ENST00000544363 KCNH4Q9UQ05 1017 aa34.67■■■■□ 3.14
CCM2-219ENST00000544363 CTDP1Q9Y5B0 961 aaPredicted RBP34.67■■■■□ 3.14
CCM2-219ENST00000544363 SMCHD1A6NHR9 2005 aa34.67■■■■□ 3.14
CCM2-219ENST00000544363 VWA5AO00534 786 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 FKBP1BP68106 108 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 ZSCAN23Q3MJ62 389 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 CCDC183Q5T5S1 534 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 OPTNQ96CV9 577 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 ATG4CQ96DT6 458 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 AGBL1Q96MI9 1066 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 DACT1Q9NYF0 836 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 PNMA2Q9UL42 364 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 MRVI1Q9Y6F6 885 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 RLFQ13129 1914 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 PIK3CDO00329 1044 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 NR1I2O75469 434 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 LETM2Q2VYF4 491 aa34.66■■■■□ 3.14
CCM2-219ENST00000544363 C4orf32Q8N8J7 132 aa34.65■■■■□ 3.14
CCM2-219ENST00000544363 PROCA1Q8NCQ7 364 aaPredicted RBP34.65■■■■□ 3.14
CCM2-219ENST00000544363 FERMT2Q96AC1 680 aa34.65■■■■□ 3.14
CCM2-219ENST00000544363 ADAMTS5Q9UNA0 930 aa34.65■■■■□ 3.14
CCM2-219ENST00000544363 FAM160A1Q05DH4 1040 aa34.64■■■■□ 3.14
CCM2-219ENST00000544363 ORC2Q13416 577 aaPredicted RBP34.64■■■■□ 3.14
CCM2-219ENST00000544363 SHC4Q6S5L8 630 aa34.64■■■■□ 3.14
CCM2-219ENST00000544363 CPXCR1Q8N123 301 aa34.64■■■■□ 3.14
CCM2-219ENST00000544363 ZNF579Q8NAF0 562 aaKnown RBP34.64■■■■□ 3.14
CCM2-219ENST00000544363 SLC10A4Q96EP9 437 aa34.64■■■■□ 3.14
CCM2-219ENST00000544363 RAVER2Q9HCJ3 691 aaKnown RBP34.64■■■■□ 3.14
CCM2-219ENST00000544363 DDX19AQ9NUU7 478 aaKnown RBP34.64■■■■□ 3.14
CCM2-219ENST00000544363 MYPNQ86TC9 1320 aa34.64■■■■□ 3.14
CCM2-219ENST00000544363 A0A1B0GVL5 298 aa34.63■■■■□ 3.13
CCM2-219ENST00000544363 CCNT1O60563 726 aaKnown RBP34.63■■■■□ 3.13
CCM2-219ENST00000544363 FOSP01100 380 aaPredicted RBP34.63■■■■□ 3.13
CCM2-219ENST00000544363 ENGASEQ8NFI3 743 aa34.63■■■■□ 3.13
CCM2-219ENST00000544363 ANO3Q9BYT9 981 aa34.63■■■■□ 3.13
CCM2-219ENST00000544363 GBA2Q9HCG7 927 aaPredicted RBP34.63■■■■□ 3.13
CCM2-219ENST00000544363 HOXC10Q9NYD6 342 aa34.63■■■■□ 3.13
CCM2-219ENST00000544363 TREML2Q5T2D2 321 aa34.63■■■■□ 3.13
CCM2-219ENST00000544363 RESP18Q5W5W9 173 aa34.63■■■■□ 3.13
CCM2-219ENST00000544363 LOC285556D6RIA3 1793 aa34.62■■■■□ 3.13
CCM2-219ENST00000544363 EDIL3O43854 480 aa34.62■■■■□ 3.13
CCM2-219ENST00000544363 GRIN1Q05586 938 aa34.62■■■■□ 3.13
CCM2-219ENST00000544363 SNW1Q13573 536 aaKnown RBP34.62■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms