RNA–Protein interactions for RNA: ENST00000543494.1

AP003419.2-201, humanhuman

APPRIS P1 TSL 3 BASIC

Gene AP003419.2, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003419.2-201ENST00000543494 IGHDP01880 384 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 ASGR1P07306 291 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 RAG1P15918 1043 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 HAND2P61296 217 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 IRX5P78411 483 aaPredicted RBP17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 FAAP100Q0VG06 881 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 SYDE2Q5VT97 1194 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 TTBK2Q6IQ55 1244 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 MFSD6Q6ZSS7 791 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 TBC1D10CQ8IV04 446 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 TTC14Q96N46 770 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 TMEM39AQ9NV64 488 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 CYP39A1Q9NYL5 469 aa17.01■□□□□ 0.31
AP003419.2-201ENST00000543494 MROH7Q68CQ1 1323 aa17■□□□□ 0.31
AP003419.2-201ENST00000543494 C11orf97A0A1B0GVM6 126 aaPredicted RBP17■□□□□ 0.31
AP003419.2-201ENST00000543494 PDHBP11177 359 aa17■□□□□ 0.31
AP003419.2-201ENST00000543494 SLC16A2P36021 539 aa17■□□□□ 0.31
AP003419.2-201ENST00000543494 CDK7P50613 346 aa17■□□□□ 0.31
AP003419.2-201ENST00000543494 EXOC6Q8TAG9 804 aa17■□□□□ 0.31
AP003419.2-201ENST00000543494 RNF41Q9H4P4 317 aaPredicted RBP17■□□□□ 0.31
AP003419.2-201ENST00000543494 MCM3APO60318 1980 aa17■□□□□ 0.31
AP003419.2-201ENST00000543494 COL6A3P12111 3177 aa16.99■□□□□ 0.31
AP003419.2-201ENST00000543494 SNHG28P0DPA3 235 aa16.99■□□□□ 0.31
AP003419.2-201ENST00000543494 TNFAIP2Q03169 654 aa16.99■□□□□ 0.31
AP003419.2-201ENST00000543494 GNASQ5JWF2 1037 aa16.99■□□□□ 0.31
AP003419.2-201ENST00000543494 NSMFQ6X4W1 530 aa16.99■□□□□ 0.31
AP003419.2-201ENST00000543494 SLC17A8Q8NDX2 589 aa16.99■□□□□ 0.31
AP003419.2-201ENST00000543494 MORC4Q8TE76 937 aa16.99■□□□□ 0.31
AP003419.2-201ENST00000543494 TBX21Q9UL17 535 aa16.99■□□□□ 0.31
AP003419.2-201ENST00000543494 GNEQ9Y223 722 aaKnown RBP16.99■□□□□ 0.31
AP003419.2-201ENST00000543494 FRMPD2Q68DX3 1309 aaPredicted RBP16.98■□□□□ 0.31
AP003419.2-201ENST00000543494 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
AP003419.2-201ENST00000543494 NT5C2P49902 561 aa16.98■□□□□ 0.31
AP003419.2-201ENST00000543494 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
AP003419.2-201ENST00000543494 FPGSQ05932 587 aa16.98■□□□□ 0.31
AP003419.2-201ENST00000543494 ZNF543Q08ER8 600 aa16.98■□□□□ 0.31
AP003419.2-201ENST00000543494 ESR2Q92731 530 aa16.98■□□□□ 0.31
AP003419.2-201ENST00000543494 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
AP003419.2-201ENST00000543494 PNMA2Q9UL42 364 aa16.98■□□□□ 0.31
AP003419.2-201ENST00000543494 NEDD4P46934 1319 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 ARVCFO00192 962 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 ZNF213O14771 459 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 SMPD1P17405 629 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 EPHB4P54760 987 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 ZNF697Q5TEC3 545 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 TAPT1Q6NXT6 567 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 NOL8Q76FK4 1167 aaKnown RBP16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 TLK2Q86UE8 772 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 VTI1AQ96AJ9 217 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 VTA1Q9NP79 307 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 ADD3Q9UEY8 706 aaKnown RBP16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 DDX49Q9Y6V7 483 aaKnown RBP16.97■□□□□ 0.31
AP003419.2-201ENST00000543494 LRRC37A2A6NM11 1700 aa16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 LOC102724159A0A0B4J2E5 919 aa16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 HIP1O00291 1037 aa16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 NFIBO00712 420 aa16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 TIMP1P01033 207 aa16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 BEX3Q00994 111 aa16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 BAATQ14032 418 aaPredicted RBP16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 PWP2Q15269 919 aaKnown RBP16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 CWC27Q6UX04 472 aaKnown RBP16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 FBXO16Q8IX29 292 aaPredicted RBP16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 FAM126BQ8IXS8 530 aa16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 RNPC3Q96LT9 517 aaKnown RBP16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 PURBQ96QR8 312 aaKnown RBP16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 PDGFCQ9NRA1 345 aa16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 Q9Y3F1 56 aa16.96■□□□□ 0.31
AP003419.2-201ENST00000543494 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.3
AP003419.2-201ENST00000543494 CABYRO75952 493 aa16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 ALDH5A1P51649 535 aaPredicted RBP16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 FSCN1Q16658 493 aaKnown RBP16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 GPATCH4Q5T3I0 446 aaKnown RBP16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 MFSD5Q6N075 450 aa16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 CXCL17Q6UXB2 119 aa16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 EEPD1Q7L9B9 569 aa16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 DGKHQ86XP1 1220 aa16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 SLC43A3Q8NBI5 491 aa16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 CLEC4DQ8WXI8 215 aa16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 FAM161BQ96MY7 647 aa16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 AP5M1Q9H0R1 490 aa16.95■□□□□ 0.3
AP003419.2-201ENST00000543494 PTPDC1A2A3K4 754 aa16.94■□□□□ 0.3
AP003419.2-201ENST00000543494 DYNC1LI2O43237 492 aaPredicted RBP16.94■□□□□ 0.3
AP003419.2-201ENST00000543494 CCDC178Q5BJE1 867 aa16.94■□□□□ 0.3
AP003419.2-201ENST00000543494 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
AP003419.2-201ENST00000543494 ZKSCAN3Q9BRR0 538 aa16.94■□□□□ 0.3
AP003419.2-201ENST00000543494 DSCC1Q9BVC3 393 aa16.94■□□□□ 0.3
AP003419.2-201ENST00000543494 LCTP09848 1927 aa16.94■□□□□ 0.3
AP003419.2-201ENST00000543494 TLR3O15455 904 aaKnown RBP16.93■□□□□ 0.3
AP003419.2-201ENST00000543494 ZEB2O60315 1214 aa16.93■□□□□ 0.3
AP003419.2-201ENST00000543494 KDM4AO75164 1064 aa16.93■□□□□ 0.3
AP003419.2-201ENST00000543494 CD4P01730 458 aa16.93■□□□□ 0.3
AP003419.2-201ENST00000543494 PTGS1P23219 599 aa16.93■□□□□ 0.3
AP003419.2-201ENST00000543494 DUSP28Q4G0W2 176 aa16.93■□□□□ 0.3
AP003419.2-201ENST00000543494 TMEM63BQ5T3F8 832 aa16.93■□□□□ 0.3
AP003419.2-201ENST00000543494 SLC30A10Q6XR72 485 aa16.93■□□□□ 0.3
AP003419.2-201ENST00000543494 RNF207Q6ZRF8 634 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms