RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 H2AFVQ71UI9 128 aa21.3■■□□□ 1
SUDS3-204ENST00000543473 QTRT2Q9H974 415 aaKnown RBP21.3■■□□□ 1
SUDS3-204ENST00000543473 TRPC5Q9UL62 973 aaPredicted RBP21.3■■□□□ 1
SUDS3-204ENST00000543473 ARMCX5Q6P1M9 558 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 TCP11Q8WWU5 503 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 PIGBQ92521 554 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 GPHNQ9NQX3 736 aaPredicted RBP21.29■■□□□ 1
SUDS3-204ENST00000543473 MMP1P03956 469 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 KCNQ4P56696 695 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 OSBP2Q969R2 916 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 GJB4Q9NTQ9 266 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 DNM3Q9UQ16 869 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 CDC42BPGQ6DT37 1551 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 RIMBP3CA6NJZ7 1639 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 RIMBP3BA6NNM3 1639 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 RIMBP3Q9UFD9 1639 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 SMCO2A6NFE2 343 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 GAS8O95995 478 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 XRCC5P13010 732 aaKnown RBP21.29■■□□□ 1
SUDS3-204ENST00000543473 CCDC110Q8TBZ0 833 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 TCHPQ9BT92 498 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 RNF26Q9BY78 433 aaPredicted RBP21.29■■□□□ 1
SUDS3-204ENST00000543473 TADA3O75528 432 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 ANKRD20A3Q5VUR7 823 aa21.29■■□□□ 1
SUDS3-204ENST00000543473 RAB3IPQ96QF0 476 aaPredicted RBP21.29■■□□□ 1
SUDS3-204ENST00000543473 ADORA1P30542 326 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 CYP27A1Q02318 531 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 PUS3Q9BZE2 481 aaKnown RBP21.28■■□□□ 1
SUDS3-204ENST00000543473 SRPRBQ9Y5M8 271 aaKnown RBP21.28■■□□□ 1
SUDS3-204ENST00000543473 H0YIN7 160 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 ZNF710Q8N1W2 664 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 SDR42E1Q8WUS8 393 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 FAM169AQ9Y6X4 670 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 OR52Z1P0C646 297 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 ZNF658Q5TYW1 1059 aaPredicted RBP21.28■■□□□ 1
SUDS3-204ENST00000543473 ADAT2Q7Z6V5 191 aaKnown RBP21.28■■□□□ 1
SUDS3-204ENST00000543473 UIMC1Q96RL1 719 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 INTS9Q9NV88 658 aaKnown RBP21.28■■□□□ 1
SUDS3-204ENST00000543473 RWDD2AQ9UIY3 292 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 PCDHB13Q9Y5F0 798 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 IFNAR1P17181 557 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 NR1D1P20393 614 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 ZBED6P86452 979 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 MUM1Q2TAK8 710 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 APBB1IPQ7Z5R6 666 aaPredicted RBP21.28■■□□□ 1
SUDS3-204ENST00000543473 TXNDC16Q9P2K2 825 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 SETBP1Q9Y6X0 1596 aa21.28■■□□□ 1
SUDS3-204ENST00000543473 RPAP1Q9BWH6 1393 aaPredicted RBP21.27■■□□□ 1
SUDS3-204ENST00000543473 HEG1Q9ULI3 1381 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 BCRP11274 1271 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 ARHGAP44Q17R89 818 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 NT5C3AQ9H0P0 336 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 ARMCX3Q9UH62 379 aaPredicted RBP21.27■■□□□ 1
SUDS3-204ENST00000543473 TULP4Q9NRJ4 1543 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 FAM170AA1A519 330 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 GCNT3O95395 438 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 IFNAR2P48551 515 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 EIF6P56537 245 aaKnown RBP21.27■■□□□ 1
SUDS3-204ENST00000543473 E4F1Q66K89 784 aaPredicted RBP21.27■■□□□ 1
SUDS3-204ENST00000543473 DHTKD1Q96HY7 919 aaPredicted RBP21.27■■□□□ 1
SUDS3-204ENST00000543473 RNF14Q9UBS8 474 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 CCZ1BP86790 482 aa21.27■■□□□ 1
SUDS3-204ENST00000543473 CCZ1P86791 482 aaPredicted RBP21.27■■□□□ 1
SUDS3-204ENST00000543473 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.27■■□□□ 1
SUDS3-204ENST00000543473 EXOC3O60645 756 aa21.27■□□□□ 0.99
SUDS3-204ENST00000543473 GYG1P46976 350 aa21.27■□□□□ 0.99
SUDS3-204ENST00000543473 IQCB1Q15051 598 aa21.27■□□□□ 0.99
SUDS3-204ENST00000543473 ZBTB21Q9ULJ3 1066 aa21.27■□□□□ 0.99
SUDS3-204ENST00000543473 PCDHB6Q9Y5E3 794 aa21.27■□□□□ 0.99
SUDS3-204ENST00000543473 SLC7A5Q01650 507 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 EMBQ6PCB8 327 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 MRPL44Q9H9J2 332 aaKnown RBP21.26■□□□□ 0.99
SUDS3-204ENST00000543473 NHEJ1Q9H9Q4 299 aaPredicted RBP21.26■□□□□ 0.99
SUDS3-204ENST00000543473 QRICH2Q9H0J4 1663 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 PTPN12Q05209 780 aaKnown RBP21.26■□□□□ 0.99
SUDS3-204ENST00000543473 KRT31Q15323 416 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 CFAP157Q5JU67 520 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 NAA35Q5VZE5 725 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 VCX3BQ9H321 246 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 CLTCQ00610 1675 aaKnown RBP21.26■□□□□ 0.99
SUDS3-204ENST00000543473 RESP18Q5W5W9 173 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 CHMP2AO43633 222 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 TRAPPC10P48553 1259 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 P2RX5Q93086 422 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 GLT8D2Q9H1C3 349 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 BIN2Q9UBW5 565 aaPredicted RBP21.26■□□□□ 0.99
SUDS3-204ENST00000543473 NCOA3Q9Y6Q9 1424 aa21.26■□□□□ 0.99
SUDS3-204ENST00000543473 AP1ARQ63HQ0 302 aa21.25■□□□□ 0.99
SUDS3-204ENST00000543473 STAG1Q8WVM7 1258 aa21.25■□□□□ 0.99
SUDS3-204ENST00000543473 GPKOWQ92917 476 aaPredicted RBP eCLIP21.25■□□□□ 0.99
SUDS3-204ENST00000543473 ACTR5Q9H9F9 607 aaPredicted RBP21.25■□□□□ 0.99
SUDS3-204ENST00000543473 MRFAP1Q9Y605 127 aa21.25■□□□□ 0.99
SUDS3-204ENST00000543473 SH2B2O14492 632 aaPredicted RBP21.25■□□□□ 0.99
SUDS3-204ENST00000543473 CTNND1O60716 968 aaKnown RBP21.25■□□□□ 0.99
SUDS3-204ENST00000543473 MOCS3O95396 460 aa21.25■□□□□ 0.99
SUDS3-204ENST00000543473 PDCLQ13371 301 aa21.25■□□□□ 0.99
SUDS3-204ENST00000543473 ARMC9Q7Z3E5 817 aa21.25■□□□□ 0.99
SUDS3-204ENST00000543473 SUN1O94901 812 aa21.25■□□□□ 0.99
SUDS3-204ENST00000543473 BCAMP50895 628 aa21.25■□□□□ 0.99
SUDS3-204ENST00000543473 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms