RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 RANBP17Q9H2T7 1088 aaKnown RBP23.48■■□□□ 1.35
DDX11-220ENST00000542244 CCPG1Q9ULG6 757 aa23.48■■□□□ 1.35
DDX11-220ENST00000542244 CCDC171Q6TFL3 1326 aa23.48■■□□□ 1.35
DDX11-220ENST00000542244 MOXD2PA6NHM9 499 aa23.47■■□□□ 1.35
DDX11-220ENST00000542244 NFIBO00712 420 aa23.47■■□□□ 1.35
DDX11-220ENST00000542244 SDSP20132 328 aa23.47■■□□□ 1.35
DDX11-220ENST00000542244 TAPT1Q6NXT6 567 aa23.47■■□□□ 1.35
DDX11-220ENST00000542244 NSMFQ6X4W1 530 aa23.47■■□□□ 1.35
DDX11-220ENST00000542244 FBXO16Q8IX29 292 aaPredicted RBP23.47■■□□□ 1.35
DDX11-220ENST00000542244 DCAF4Q8WV16 495 aa23.47■■□□□ 1.35
DDX11-220ENST00000542244 ZKSCAN3Q9BRR0 538 aa23.47■■□□□ 1.35
DDX11-220ENST00000542244 TBX21Q9UL17 535 aa23.47■■□□□ 1.35
DDX11-220ENST00000542244 GNEQ9Y223 722 aaKnown RBP23.47■■□□□ 1.35
DDX11-220ENST00000542244 NEDD4P46934 1319 aa23.47■■□□□ 1.35
DDX11-220ENST00000542244 TOP1P11387 765 aaKnown RBP23.46■■□□□ 1.35
DDX11-220ENST00000542244 RAG1P15918 1043 aa23.46■■□□□ 1.35
DDX11-220ENST00000542244 SMPD1P17405 629 aa23.46■■□□□ 1.35
DDX11-220ENST00000542244 TNFAIP2Q03169 654 aa23.46■■□□□ 1.35
DDX11-220ENST00000542244 TKFCQ3LXA3 575 aa23.46■■□□□ 1.35
DDX11-220ENST00000542244 GNASQ5JWF2 1037 aa23.46■■□□□ 1.35
DDX11-220ENST00000542244 SYDE2Q5VT97 1194 aa23.46■■□□□ 1.35
DDX11-220ENST00000542244 FAM109BQ6ICB4 259 aaPredicted RBP23.46■■□□□ 1.35
DDX11-220ENST00000542244 BTNL9Q6UXG8 535 aa23.46■■□□□ 1.35
DDX11-220ENST00000542244 CHD1LQ86WJ1 897 aa23.46■■□□□ 1.35
DDX11-220ENST00000542244 TTYH1Q9H313 450 aaPredicted RBP23.46■■□□□ 1.35
DDX11-220ENST00000542244 CPVLQ9H3G5 476 aa23.46■■□□□ 1.35
DDX11-220ENST00000542244 ICAM1P05362 532 aa23.45■■□□□ 1.34
DDX11-220ENST00000542244 PDHBP11177 359 aa23.45■■□□□ 1.34
DDX11-220ENST00000542244 NUCB1Q02818 461 aa23.45■■□□□ 1.34
DDX11-220ENST00000542244 BAATQ14032 418 aaPredicted RBP23.45■■□□□ 1.34
DDX11-220ENST00000542244 C16orf59Q7L2K0 433 aa23.45■■□□□ 1.34
DDX11-220ENST00000542244 NUP133Q8WUM0 1156 aa23.45■■□□□ 1.34
DDX11-220ENST00000542244 TOX2Q96NM4 488 aa23.45■■□□□ 1.34
DDX11-220ENST00000542244 IL25Q9H293 177 aa23.45■■□□□ 1.34
DDX11-220ENST00000542244 TCP11L1Q9NUJ3 509 aa23.45■■□□□ 1.34
DDX11-220ENST00000542244 GRIN2DO15399 1336 aa23.44■■□□□ 1.34
DDX11-220ENST00000542244 ZMYM6O95789 1325 aa23.44■■□□□ 1.34
DDX11-220ENST00000542244 NKX3-2P78367 333 aa23.44■■□□□ 1.34
DDX11-220ENST00000542244 PPP4R3BQ5MIZ7 849 aa23.44■■□□□ 1.34
DDX11-220ENST00000542244 AKNAD1Q5T1N1 836 aa23.44■■□□□ 1.34
DDX11-220ENST00000542244 CXCL17Q6UXB2 119 aa23.44■■□□□ 1.34
DDX11-220ENST00000542244 CLEC4DQ8WXI8 215 aa23.44■■□□□ 1.34
DDX11-220ENST00000542244 VTI1AQ96AJ9 217 aa23.44■■□□□ 1.34
DDX11-220ENST00000542244 GLT1D1Q96MS3 346 aa23.44■■□□□ 1.34
DDX11-220ENST00000542244 RWDD1Q9H446 243 aaPredicted RBP23.44■■□□□ 1.34
DDX11-220ENST00000542244 ELP1O95163 1332 aa23.43■■□□□ 1.34
DDX11-220ENST00000542244 DCDC2CA8MYV0 355 aa23.43■■□□□ 1.34
DDX11-220ENST00000542244 FPGSQ05932 587 aa23.43■■□□□ 1.34
DDX11-220ENST00000542244 SLC30A10Q6XR72 485 aa23.43■■□□□ 1.34
DDX11-220ENST00000542244 NOL8Q76FK4 1167 aaKnown RBP23.43■■□□□ 1.34
DDX11-220ENST00000542244 SEMA6BQ9H3T3 888 aa23.43■■□□□ 1.34
DDX11-220ENST00000542244 ASB14A6NK59 587 aa23.42■■□□□ 1.34
DDX11-220ENST00000542244 ARVCFO00192 962 aa23.42■■□□□ 1.34
DDX11-220ENST00000542244 DLL1O00548 723 aa23.42■■□□□ 1.34
DDX11-220ENST00000542244 DYNC1LI2O43237 492 aaPredicted RBP23.42■■□□□ 1.34
DDX11-220ENST00000542244 TIMP1P01033 207 aa23.42■■□□□ 1.34
DDX11-220ENST00000542244 GOLGA8HP0CJ92 632 aa23.42■■□□□ 1.34
DDX11-220ENST00000542244 CWC27Q6UX04 472 aaKnown RBP23.42■■□□□ 1.34
DDX11-220ENST00000542244 TLK2Q86UE8 772 aa23.42■■□□□ 1.34
DDX11-220ENST00000542244 FAM126BQ8IXS8 530 aa23.42■■□□□ 1.34
DDX11-220ENST00000542244 PCSK9Q8NBP7 692 aaKnown RBP23.42■■□□□ 1.34
DDX11-220ENST00000542244 RNPC3Q96LT9 517 aaKnown RBP23.42■■□□□ 1.34
DDX11-220ENST00000542244 CDX2Q99626 313 aaPredicted RBP23.42■■□□□ 1.34
DDX11-220ENST00000542244 OSBPL3Q9H4L5 887 aa23.42■■□□□ 1.34
DDX11-220ENST00000542244 PSMC6P62333 389 aa23.41■■□□□ 1.34
DDX11-220ENST00000542244 ZNF543Q08ER8 600 aa23.41■■□□□ 1.34
DDX11-220ENST00000542244 ZNF697Q5TEC3 545 aa23.41■■□□□ 1.34
DDX11-220ENST00000542244 MFSD6Q6ZSS7 791 aa23.41■■□□□ 1.34
DDX11-220ENST00000542244 MORC4Q8TE76 937 aa23.41■■□□□ 1.34
DDX11-220ENST00000542244 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.41■■□□□ 1.348e-10■■■□□ 16.8
DDX11-220ENST00000542244 PPP1R12CQ9BZL4 782 aa23.41■■□□□ 1.34
DDX11-220ENST00000542244 UMODL1Q5DID0 1318 aa23.4■■□□□ 1.34
DDX11-220ENST00000542244 A0A0U1RQG5 324 aaPredicted RBP23.4■■□□□ 1.34
DDX11-220ENST00000542244 SNHG28P0DPA3 235 aa23.4■■□□□ 1.34
DDX11-220ENST00000542244 SMAD3P84022 425 aaKnown RBP23.4■■□□□ 1.34
DDX11-220ENST00000542244 UBA5Q9GZZ9 404 aa23.4■■□□□ 1.34
DDX11-220ENST00000542244 SPC25Q9HBM1 224 aa23.4■■□□□ 1.34
DDX11-220ENST00000542244 CD4P01730 458 aa23.39■■□□□ 1.33
DDX11-220ENST00000542244 ACRP10323 421 aa23.39■■□□□ 1.33
DDX11-220ENST00000542244 CSF2RAP15509 400 aa23.39■■□□□ 1.33
DDX11-220ENST00000542244 PDE4AP27815 886 aa23.39■■□□□ 1.33
DDX11-220ENST00000542244 ALDH5A1P51649 535 aaPredicted RBP23.39■■□□□ 1.33
DDX11-220ENST00000542244 FSCN1Q16658 493 aaKnown RBP23.39■■□□□ 1.33
DDX11-220ENST00000542244 SLC43A3Q8NBI5 491 aa23.39■■□□□ 1.33
DDX11-220ENST00000542244 PPP1R13LQ8WUF5 828 aa23.39■■□□□ 1.33
DDX11-220ENST00000542244 GRXCR1A8MXD5 290 aa23.38■■□□□ 1.33
DDX11-220ENST00000542244 RBAK-RBAKDNI3L0D1 243 aa23.38■■□□□ 1.33
DDX11-220ENST00000542244 CYP2C18P33260 490 aa23.38■■□□□ 1.33
DDX11-220ENST00000542244 MFSD5Q6N075 450 aa23.38■■□□□ 1.33
DDX11-220ENST00000542244 KIAA1211Q6ZU35 1233 aa23.38■■□□□ 1.33
DDX11-220ENST00000542244 MYLIPQ8WY64 445 aa23.38■■□□□ 1.33
DDX11-220ENST00000542244 TBC1D5Q92609 795 aa23.38■■□□□ 1.33
DDX11-220ENST00000542244 PTPDC1A2A3K4 754 aa23.37■■□□□ 1.33
DDX11-220ENST00000542244 B4E1Z4 1266 aa23.37■■□□□ 1.33
DDX11-220ENST00000542244 KDM4AO75164 1064 aa23.37■■□□□ 1.33
DDX11-220ENST00000542244 CALML3P27482 149 aa23.37■■□□□ 1.33
DDX11-220ENST00000542244 TMEM240Q5SV17 173 aa23.37■■□□□ 1.33
DDX11-220ENST00000542244 IQSEC1Q6DN90 963 aa23.37■■□□□ 1.33
DDX11-220ENST00000542244 TICAM2Q86XR7 235 aa23.37■■□□□ 1.33
DDX11-220ENST00000542244 TRPV6Q9H1D0 765 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms