RNA–Protein interactions for RNA: ENST00000542174.5

CDK2AP1-205, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-205ENST00000542174 NEK8Q86SG6 692 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 ZNF710Q8N1W2 664 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 RBM46Q8TBY0 533 aaKnown RBP16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 ANKRD7Q92527 254 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 L3MBTL3Q96JM7 780 aaPredicted RBP16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 GTPBP4Q9BZE4 634 aaKnown RBP16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 ZNF541Q9H0D2 1346 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 ZSCAN12O43309 604 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 TTLL1O95922 423 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 OR52Z1P0C646 297 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 PBX1P40424 430 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 PICALMQ13492 652 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 PPP1R18Q6NYC8 613 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 TC2NQ8N9U0 490 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 ZNF592Q92610 1267 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 PIGSQ96S52 555 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 EHD4Q9H223 541 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 BLZF1Q9H2G9 400 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 DDX4Q9NQI0 724 aaKnown RBP16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 KBTBD4Q9NVX7 518 aa16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 LIMA1Q9UHB6 759 aaKnown RBP16.66■□□□□ 0.26
CDK2AP1-205ENST00000542174 GOLGA6L9A6NEM1 432 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 AKR1B1P15121 316 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 HDLBPQ00341 1268 aaKnown RBP16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 PAK1Q13153 545 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 NAALADL2Q58DX5 795 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 HSP90AA4PQ58FG1 418 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 STAMQ92783 540 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 PANX2Q96RD6 677 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 BAG1Q99933 345 aaPredicted RBP16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 VPS33BQ9H267 617 aa16.65■□□□□ 0.26
CDK2AP1-205ENST00000542174 SIPA1L1O43166 1804 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 PCNTO95613 3336 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 G3V3G9 751 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 STX17P56962 302 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 DCAF8Q5TAQ9 597 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 APOBEC3HQ6NTF7 200 aaKnown RBP16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 CDC42EP5Q6NZY7 148 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 REXO1Q8N1G1 1221 aaKnown RBP16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 ZDHHC15Q96MV8 337 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 CPVLQ9H3G5 476 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 CTNND2Q9UQB3 1225 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 SCN4AP35499 1836 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 ITIH6Q6UXX5 1313 aa16.64■□□□□ 0.25
CDK2AP1-205ENST00000542174 SHMT1P34896 483 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 ETF1P62495 437 aaKnown RBP16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 TSC1Q92574 1164 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 SCN9AQ15858 1988 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 AKR1B15C9JRZ8 316 aaPredicted RBP16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 F8W031 263 aaPredicted RBP16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 H7C1D1 291 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 CCNT1O60563 726 aaKnown RBP16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 HSPA6P17066 643 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 ZNF543Q08ER8 600 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 DOK7Q18PE1 504 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 GPATCH4Q5T3I0 446 aaKnown RBP16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 REXO1L1PQ8IX06 675 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 NELFBQ8WX92 580 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 NAA15Q9BXJ9 866 aaKnown RBP16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 UBA5Q9GZZ9 404 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 L2HGDHQ9H9P8 463 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 VAT1LQ9HCJ6 419 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 MYH7BA7E2Y1 1941 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 PHLPP2Q6ZVD8 1323 aa16.63■□□□□ 0.25
CDK2AP1-205ENST00000542174 PNMA6FA0A0J9YX94 578 aa16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 RHOBTB3O94955 611 aa16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 CDC25AP30304 524 aa16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 ADCY7P51828 1080 aa16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 LETM2Q2VYF4 491 aa16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 CABP7Q86V35 215 aa16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 TBCKQ8TEA7 893 aa16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 CCDC51Q96ER9 411 aa16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 DHX36Q9H2U1 1008 aaKnown RBP16.62■□□□□ 0.25
CDK2AP1-205ENST00000542174 TEX33O43247 280 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 KLRC4O43908 158 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 PPP1R2P41236 205 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 CRKP46108 304 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 FSTL1Q12841 308 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 STIM1Q13586 685 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 AOC3Q16853 763 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 STRIP1Q5VSL9 837 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 ADSSL1Q8N142 457 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 RASSF8Q8NHQ8 419 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 CCDC47Q96A33 483 aaKnown RBP16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 PP2D1A8MPX8 630 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 PRCPP42785 496 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 SCNN1DP51172 638 aa16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 NCBP1Q09161 790 aaKnown RBP16.61■□□□□ 0.25
CDK2AP1-205ENST00000542174 LRRC47Q8N1G4 583 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms