RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 CROCCP3Q8IVE0 287 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 BRSK2Q8IWQ3 736 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 ALDH16A1Q8IZ83 802 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 SPERTQ8NA61 448 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 CCDC148Q8NFR7 591 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 SH3TC2Q8TF17 1288 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 ZC3H15Q8WU90 426 aaKnown RBP5.72□□□□□ -1.49
SNHG1-218ENST00000541615 NCSTNQ92542 709 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 KIFAP3Q92845 792 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 CASP10Q92851 521 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 L3MBTL2Q969R5 705 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 TUBGCP5Q96RT8 1024 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 CARD11Q9BXL7 1154 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 PRKD2Q9BZL6 878 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 NSRP1Q9H0G5 558 aaKnown RBP5.72□□□□□ -1.49
SNHG1-218ENST00000541615 CBX8Q9HC52 389 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 PREBQ9HCU5 417 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 IL1RAPL1Q9NZN1 696 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 SAP30BPQ9UHR5 308 aaKnown RBP5.72□□□□□ -1.49
SNHG1-218ENST00000541615 SCOCQ9UIL1 159 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 FAM184BQ9ULE4 1060 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 ASAP1Q9ULH1 1129 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 PARP3Q9Y6F1 533 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 GAKO14976 1311 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 TTC21BQ7Z4L5 1316 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 TIAM1Q13009 1591 aa5.72□□□□□ -1.49
SNHG1-218ENST00000541615 GRIN2AQ12879 1464 aa5.71□□□□□ -1.49
SNHG1-218ENST00000541615 ATAD2BQ9ULI0 1458 aa5.71□□□□□ -1.49
SNHG1-218ENST00000541615 CARMIL1Q5VZK9 1371 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 USP47Q96K76 1375 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 MATN2O00339 956 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 NRG2O14511 850 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 N4BP3O15049 544 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 AP5Z1O43299 807 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 STRNO43815 780 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 SNX2O60749 519 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 CBFA2T3O75081 653 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 GFPT2O94808 682 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 FAM107AO95990 144 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 TGFB3P10600 412 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 CD9P21926 228 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 CALB2P22676 271 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 IL4RP24394 825 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 ATP5DP30049 168 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 GBP1P32455 592 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 GNL1P36915 607 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 LIFRP42702 1097 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 ZNF165P49910 485 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 KIF11P52732 1056 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 NMIQ13287 307 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 COG2Q14746 738 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.71□□□□□ -1.52e-12■■□□□ 11.6
SNHG1-218ENST00000541615 CFAP58Q5T655 872 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 GKAP1Q5VSY0 366 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 TBC1D9BQ66K14 1250 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 E4F1Q66K89 784 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 TMEM53Q6P2H8 277 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 TRAF7Q6Q0C0 670 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 DZIP1LQ8IYY4 767 aaKnown RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 CLASRPQ8N2M8 674 aaKnown RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 CARNMT1Q8N4J0 409 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 CCDC82Q8N4S0 544 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 ANKRD44Q8N8A2 993 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 IGSF22Q8N9C0 903 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 ATRIPQ8WXE1 791 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 DPF3Q92784 378 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 EFHD2Q96C19 240 aaPredicted RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 HAUS1Q96CS2 278 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 RRP36Q96EU6 259 aaKnown RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 HIC2Q96JB3 615 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 CLMNQ96JQ2 1002 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 OLFM3Q96PB7 478 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 MPHOSPH9Q99550 1183 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 UQCC2Q9BRT2 126 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 NUP58Q9BVL2 599 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 UBE2OQ9C0C9 1292 aaKnown RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 LRRC27Q9C0I9 530 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 KAT14Q9H8E8 782 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 PICK1Q9NRD5 415 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 PCMTD2Q9NV79 361 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 MAP3K20Q9NYL2 800 aaKnown RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 XPO7Q9UIA9 1087 aaKnown RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 ATPIF1Q9UII2 106 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 LRRC42Q9Y546 428 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 PCDHB15Q9Y5E8 787 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 RPRD2Q5VT52 1461 aaKnown RBP5.71□□□□□ -1.5
SNHG1-218ENST00000541615 ARHGAP35Q9NRY4 1499 aa5.71□□□□□ -1.5
SNHG1-218ENST00000541615 ZNF608Q9ULD9 1512 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 DYTNA2CJ06 578 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 BOLA2-SMG1P6H3BVE0 249 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 LCE2BO14633 110 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 PER1O15534 1290 aaPredicted RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 ARHGAP6O43182 974 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 ZC3H11AO75152 810 aaKnown RBP eCLIP5.7□□□□□ -1.51e-6■■□□□ 11.7
SNHG1-218ENST00000541615 LCA5LO95447 670 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 LDHAP00338 332 aaKnown RBP5.7□□□□□ -1.5
SNHG1-218ENST00000541615 ALADP13716 330 aa5.7□□□□□ -1.5
SNHG1-218ENST00000541615 EIF2S2P20042 333 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms