RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 FGRP09769 529 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 XRCC5P13010 732 aaKnown RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 GCLCP48506 637 aaPredicted RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 NT5C2P49902 561 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 CSPP1Q1MSJ5 1256 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 TMEM67Q5HYA8 995 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 CTR9Q6PD62 1173 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 SH3BP5LQ7L8J4 393 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 PROCA1Q8NCQ7 364 aaPredicted RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 ESR2Q92731 530 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 LY9Q9HBG7 655 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 NCOA5Q9HCD5 579 aaKnown RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 DCP1AQ9NPI6 582 aaPredicted RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 TOMM22Q9NS69 142 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.47□□□□□ -0.89
LMO3-226ENST00000541589 ZSWIM5Q9P217 1185 aa9.47□□□□□ -0.89
LMO3-226ENST00000541589 PHIPQ8WWQ0 1821 aa9.46□□□□□ -0.89
LMO3-226ENST00000541589 NID2Q14112 1375 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 ERICH2A1L162 156 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 USP17L12C9JPN9 530 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 USP17L21D6R901 530 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 H3BQV1 296 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 DTNBO60941 627 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 SLC3A2P08195 630 aaKnown RBP9.46□□□□□ -0.9
LMO3-226ENST00000541589 SLURP2P0DP57 97 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 METAP2P50579 478 aaKnown RBP eCLIP9.46□□□□□ -0.9
LMO3-226ENST00000541589 SMAD3P84022 425 aaKnown RBP9.46□□□□□ -0.9
LMO3-226ENST00000541589 CACNB2Q08289 660 aaPredicted RBP9.46□□□□□ -0.9
LMO3-226ENST00000541589 DIXDC1Q155Q3 683 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 RRP12Q5JTH9 1297 aaKnown RBP9.46□□□□□ -0.9
LMO3-226ENST00000541589 APOA5Q6Q788 366 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 NFXL1Q6ZNB6 911 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 TMTC2Q8N394 836 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 RGS22Q8NE09 1264 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 DDX11Q96FC9 970 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 CHAMP1Q96JM3 812 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 LBHD1Q9BQE6 289 aaPredicted RBP9.46□□□□□ -0.9
LMO3-226ENST00000541589 IDI2Q9BXS1 227 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 INCENPQ9NQS7 918 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.46□□□□□ -0.9
LMO3-226ENST00000541589 MORF4L1Q9UBU8 362 aa9.46□□□□□ -0.9
LMO3-226ENST00000541589 GAKO14976 1311 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 GPR75-ASB3A0A0A6YYF3 556 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 CCDC69A6NI79 296 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 CPLX1O14810 134 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 ZBTB43O43298 467 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 ORC4O43929 436 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 ENTPD3O75355 529 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 CDKL5O76039 1030 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 FOSL2P15408 326 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 NCLP19338 710 aaKnown RBP9.45□□□□□ -0.9
LMO3-226ENST00000541589 CYP2B6P20813 491 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 USP5P45974 858 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 RCAN1P53805 252 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 WTAPQ15007 396 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 SHHQ15465 462 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 CPLX2Q6PUV4 134 aaKnown RBP9.45□□□□□ -0.9
LMO3-226ENST00000541589 SYNE3Q6ZMZ3 975 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 CCDC84Q86UT8 332 aaPredicted RBP9.45□□□□□ -0.9
LMO3-226ENST00000541589 SH3RF3Q8TEJ3 882 aaPredicted RBP9.45□□□□□ -0.9
LMO3-226ENST00000541589 USP6NLQ92738 828 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 UBAC1Q9BSL1 405 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 GZF1Q9H116 711 aaPredicted RBP9.45□□□□□ -0.9
LMO3-226ENST00000541589 ZSCAN16Q9H4T2 348 aaPredicted RBP9.45□□□□□ -0.9
LMO3-226ENST00000541589 USP40Q9NVE5 1235 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 CNPY2Q9Y2B0 182 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
LMO3-226ENST00000541589 SLC12A7Q9Y666 1083 aa9.45□□□□□ -0.9
LMO3-226ENST00000541589 CYP2D7A0A087X1C5 515 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 GOLGA8AA7E2F4 631 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 CCND3P30281 292 aaPredicted RBP9.44□□□□□ -0.9
LMO3-226ENST00000541589 BTDP43251 543 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 KRT85P78386 507 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 RESTQ13127 1097 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
LMO3-226ENST00000541589 C9orf50Q5SZB4 431 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 FOXD4L3Q6VB84 417 aaPredicted RBP9.44□□□□□ -0.9
LMO3-226ENST00000541589 AMOTL1Q8IY63 956 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 TRMT44Q8IYL2 757 aaKnown RBP9.44□□□□□ -0.9
LMO3-226ENST00000541589 USP38Q8NB14 1042 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 GPT2Q8TD30 523 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 FAM122AQ96E09 287 aa9.44□□□□□ -0.9
LMO3-226ENST00000541589 ASCC2Q9H1I8 757 aaPredicted RBP9.44□□□□□ -0.9
LMO3-226ENST00000541589 TSR3Q9UJK0 312 aaKnown RBP9.44□□□□□ -0.9
LMO3-226ENST00000541589 ISY1Q9ULR0 285 aaKnown RBP9.44□□□□□ -0.9
LMO3-226ENST00000541589 ROBO3Q96MS0 1386 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 LTBP2Q14767 1821 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 TNKSO95271 1327 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 TMEM265A0A087WTH1 108 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 DDTLA6NHG4 134 aaPredicted RBP9.43□□□□□ -0.9
LMO3-226ENST00000541589 FDPSP14324 419 aaKnown RBP9.43□□□□□ -0.9
LMO3-226ENST00000541589 DNM1Q05193 864 aaKnown RBP9.43□□□□□ -0.9
LMO3-226ENST00000541589 PDE4BQ07343 736 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 SEC23AQ15436 765 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 C12orf60Q5U649 245 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 FERMT3Q86UX7 667 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
LMO3-226ENST00000541589 IQCA1Q86XH1 822 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms